Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value SEQ14764 338 2e-90 SEQ17146 333 9e-89 >SEQ14764 Length=5928 Score = 338 bits (374), Expect = 2e-90 Identities = 414/564 (73%), Gaps = 12/564 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||||||||| |||| | ||| ||| ||| |||| | | ||||| || Sbjct 826 TCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACTCTACGCGTGATTTCC 885 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| |||||| | ||||| | | |||||||||| ||| ||||| | ||||||||| Sbjct 886 GACCACGCTGAGCGCACCTTCGTACTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCAG 944 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||||||| || |||| | ||| ||| | ||| || |||||| || Sbjct 945 TCAAACTACCCACCAGACATGGTCCTCGTCCCGGATAACGGGACAGAGTTAGAACCTCAA 1004 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || ||| |||||||||||| | | ||||| | | ||| |||| || | || || Sbjct 1005 TATTACCAGGGTGGTATTTCAAGGATGGCTCCATAGCAACTGGCGTCGCTACTTCTAAGC 1064 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 |||||||||||||||||||| | | || |||| |||||| ||| ||||| | Sbjct 1065 CTCCCACCTATCCTACACAAGTAAGATCAAAGTTCAATGTCAAGCTGCAGTAAAGGTTCA 1124 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| |||| |||||| | | ||||||| || | | | ||||||| | Sbjct 1125 CGGGGTCTTTCCGTCTAGCCGCGGGTACACCGCATCTTCACGGCGATTTCGATTTCACTG 1184 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 |||| || | |||||||| || ||| ||||||||||||||||||||||||||| Sbjct 1185 AGCCTCTGCTGGAGACAGCGCCCCCATCATTATGCCATTCGTGCAGGTCGGAACTTACCC 1244 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1245 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 1304 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 || | || || | || ||| || | ||||||||||||||||| Sbjct 1305 GATCAAGAGCTTCGCTTAC----------GCTAACCCCATCAATTAACCTTCCAGCACCG 1354 Query 540 GGCAGGCGTCAGTCCGTATACCTC 563 ||||||| ||| || ||||| || Sbjct 1355 GGCAGGCATCACACCCTATACGTC 1378 >SEQ17146 Length=6450 Score = 333 bits (368), Expect = 9e-89 Identities = 414/564 (73%), Gaps = 21/564 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||| ||| | |||| |||||| || ||| ||| || ||||| || | | || || Sbjct 1450 TCGAGCTGTCACTCTCACAGTCAGGCGGGCTTATGCCATTGCACTCGACAGCCGGTTTCC 1509 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| | ||||| ||| | | |||||||||||||| ||||||||| | |||||||||| Sbjct 1510 GACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTACACTTTGGGAGG-CGACCGCCCCAG 1568 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| ||||||| ||| ||||| ||| | | | || | ||||||| ||| Sbjct 1569 TCAAACTGCCCACCATGCAGGGTCCCGGACCAGGCTTACTGGTCTCGGTTAGACATCAGA 1628 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 | |||| || ||||||||| | | |||||| || ||| | || ||| || Sbjct 1629 AAAATTCAGGGTCGTATTTCAAGGATGGCTCCACCGGTGCTGGCGCCCCGGCTTCAAAGC 1688 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 |||| |||||||||||||| | | | |||||| | | ||||| ||| ||||| | Sbjct 1689 CTCCGACCTATCCTACACAGAATGTCTCTGATGCCACTGCAAAGCTGCAGTAAAGGTTCA 1748 Query 301 G-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||| |||| ||||| | | | ||||||| || | | | ||||||| | | Sbjct 1749 TAGGGTCTTTCCGTCTGACCGCGGGTACCCCGCATCTTCACGGGGAATTCAATTTCGCTG 1808 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 | | || | ||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 1809 AGTCGATGCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 1868 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 1869 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTC 1928 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 ||| ||| ||| | ||| ||| ||||||||||||||| |||||| Sbjct 1929 AAT--------TCA--------GTGCT-TGCACAC--CTCCTCTTAACCTTCCGGCACCG 1969 Query 540 GGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||| || ||||| || Sbjct 1970 GGCAGGCGTCAGGCCCTATACGTC 1993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701971982592