Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value SEQ17146 179 8e-43 SEQ14764 156 9e-36 >SEQ17146 Length=6450 Score = 179 bits (198), Expect = 8e-43 Identities = 160/199 (80%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| ||| ||||| || ||||| | | ||||| |||| || ||| |||| Sbjct 5406 TTTACAATCCGAAGA-CCTTCTTCACACACGCGGCATTGCTGGATCAGGCTTTCGCCCAT 5464 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 5465 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 5524 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| || | |||||||| | | ||||| ||| | | || ||| |||| ||||||| || Sbjct 5525 TGGCTGATCATCCTCTCAAACCAGCTATCGATCATCGCCTTGGTAGGCCTTTACCCCACC 5584 Query 269 TACTACCTAATGGAACGCA 287 |||| ||||| ||||||| Sbjct 5585 AACTAGCTAATCGAACGCA 5603 >SEQ14764 Length=5928 Score = 156 bits (172), Expect = 9e-36 Identities = 150/191 (79%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||| || || ||||| || ||||| | ||||||| |||| | | |||| Sbjct 4904 TTTACAA-CCATAAGGCCTTCTTCACACACGCGGCATGGCTGGATCAGGGTTCCCCCCAT 4962 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 4963 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 5022 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| ||| | |||||||||| || ||| ||||| | || ||| |||| ||||||| || Sbjct 5023 TGGCGGATCATCCTCTCAGACCCGCTACAGATCGTCGCCTTGGTAGGCCTTTACCCCACC 5082 Query 269 TACTACCTAAT 279 |||| ||||| Sbjct 5083 AACTAGCTAAT 5093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068531282304