Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value SEQ10664 241 2e-61 >SEQ10664 Length=18453 Score = 241 bits (266), Expect = 2e-61 Identities = 231/287 (80%), Gaps = 13/287 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| | Sbjct 5461 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 5518 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 5519 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 5578 Query 121 GAACGGGGTGATTCT---CTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCC 175 ||| | | ||||||| | | |||||| |||| ||||| ||||| | || | | | Sbjct 5579 GAAAGCGATGATTCTTAGCCCTCGCACATTTTAGTTGGATAAGAATAAGACTTTTGTCGC 5638 Query 176 CGAACCTTAGCAGGCCGGCAACGGGCGTCC--CGCGGAA--GCGCGGGGCGCTCAGCTGG 231 |||||| |||||||| ||||| || ||| |||||| || ||| ||| || || Sbjct 5639 CGAACCATAGCAGGCTGGCAA-TGGTATCCTTAGCGGAAAGGCTTTGGGTGCT-TGCCGG 5696 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 | || ||||| ||| |||||| |||||||||||||||| ||||| Sbjct 5697 TGAATAGCAATGTCATAATGCGCGAGGATAAATCCTTTGCATACGAC 5743 Score = 241 bits (266), Expect = 2e-61 Identities = 231/287 (80%), Gaps = 13/287 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| | Sbjct 13802 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 13859 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 13860 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 13919 Query 121 GAACGGGGTGATTCT---CTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCC 175 ||| | | ||||||| | | |||||| |||| ||||| ||||| | || | | | Sbjct 13920 GAAAGCGATGATTCTTAGCCCTCGCACATTTTAGTTGGATAAGAATAAGACTTTTGTCGC 13979 Query 176 CGAACCTTAGCAGGCCGGCAACGGGCGTCC--CGCGGAA--GCGCGGGGCGCTCAGCTGG 231 |||||| |||||||| ||||| || ||| |||||| || ||| ||| || || Sbjct 13980 CGAACCATAGCAGGCTGGCAA-TGGTATCCTTAGCGGAAAGGCTTTGGGTGCT-TGCCGG 14037 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 | || ||||| ||| |||||| |||||||||||||||| ||||| Sbjct 14038 TGAATAGCAATGTCATAATGCGCGAGGATAAATCCTTTGCATACGAC 14084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819000473088