Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq182232 194 5e-47 >seq182232 Length=1371 Score = 194 bits (214), Expect = 5e-47 Identities = 299/423 (71%), Gaps = 8/423 (2%) Strand=Plus/Plus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 || ||||| |||||||| ||||| || || |||| ||||||||||| ||||| || || Sbjct 118 ATTAGGAATACTTCACGCGCACCAGCACCTTGGGCAGATTCACGGATCGCACGGCGTTCT 177 Query 63 ACCTGGGTGGACTTGCAC-GGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACT 121 || || || | | || || || || | |||||| || ||||| || ||| ||||| Sbjct 178 ACTTGAGTCG-CGCCAACTGGTACACAAACCAGCACGCGTGGGCTTGGGCGCATAAAACT 236 Query 122 GTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGC 181 || ||||| | || ||||||| |||||||| || ||| ||| || || || Sbjct 237 ATTGCTATGAACTTGTTTAATGAAGTGTTGCAGCATTTTTTCGGTGACAAAAAAATCAGC 296 Query 182 GATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCAT 241 ||| ||||| |||||||| || ||||| || || || ||||| |||||||| || | ||| Sbjct 297 GATAACGCCATCTTTCATTGGGCGAATAGCTGCTATGTTGCCAGGTGTACGCCCCAACAT 356 Query 242 GCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTT--CTGA----TTACCATGGGTCCG 295 | || || || || || || | |||||||| | || || || || Sbjct 357 TTGTTTTGCATCATAACCAACTGCCGCCACACTTTTAGCAGAACCGGCACGATCCTGACG 416 Query 296 AATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGT 355 ||| || ||||| || || ||||| || || || || | | |||||||||||||| Sbjct 417 AATAGCAACAACGGAAGGTTCATTAAGAACAATGCCTTGTCCTTTAACGTAAATAAGGGT 476 Query 356 GTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAA 415 |||||||| |||| ||| ||||| | ||| | |||||||||||||| | ||| || || Sbjct 477 ATTGGCAGTACCCAAGTCGATGGACAAGTCGTTAGAAAACATGCCACGAAATTTTTTAAA 536 Query 416 CAT 418 ||| Sbjct 537 CAT 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1351118918880