Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq183170 96.9 6e-18 >seq183170 Length=4508 Score = 96.9 bits (106), Expect = 6e-18 Identities = 139/195 (71%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 93 ACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTT 152 || || ||||| ||||| | |||| | ||| || || ||||| |||||||||||||||| Sbjct 808 ACGGCTAGGAATGCTTCCT-GTGGCAATTCAACATTACCCACCTGCTTCATGCGTTTTTT 866 Query 153 ACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTT 212 ||| | || || || | |||||||| ||||||||| || || || || || ||||| Sbjct 867 CCCGTCTTTCTGTTTTTGTAGCAGCTTTTTCTTACGGCTGACATCGCCACCATAACATTT 926 Query 213 GGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAAT 272 || || || || || | || || | | | ||||||||||| || | ||||| Sbjct 927 AGCAAGCACATTTTTACGTAGTTGTTTAATAGTTGAACGCGCAATGATGTGGCTACCAAT 986 Query 273 GGCGGCCTGGATCGC 287 || ||||| || || Sbjct 987 TGCAGCCTGAATAGC 1001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 840105595865