Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq468 237 1e-57
seq453 237 1e-57
seq442 127 2e-24
>seq468
Length=1118636
Score = 237 bits (262), Expect = 1e-57
Identities = 539/805 (67%), Gaps = 13/805 (2%)
Strand=Plus/Minus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
||||| || | | |||||||||| |||||| || ||||||| || |||||| |||
Sbjct 1106892 GAACCATTACTTCGAGAGAATCCTAATCGTTTTGTTGTGTTCCCTATTGAGTATCCTGAT 1106833
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|||||| ||||| || || || ||||| || |||||||| || || ||||| || ||
Sbjct 1106832 ATTTGGGAAATGTATAAGAAAGCTGAAGCCTCGTTCTGGACTGTTGAAGAGGTTGACTTA 1106773
Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
|| ||| | | |||||||| ||| ||| ||| | |||| ||||| || |
Sbjct 1106772 TCTCGAGATTTAACTGACTGGGCTAAGC--TTAACGAT-GAAGAACGTCATTTTATCAGC 1106716
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|||||||||| ||||| | || || |||||||| || ||||| |||||| ||| |
Sbjct 1106715 TATGTGTTGGCATTCTTCTCTGCCTCAGACGGTATTGTAAATGAAAATTTAGCTGAAAGA 1106656
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
|| | || | || | | || || || ||||| || || || || ||||| ||
Sbjct 1106655 TTTATTCGTGATATCCAGATTACCGAAGCTCGATGTTTTTATGGTTTTCAAATTGCGATT 1106596
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
|||||||| ||||| ||||||||||| | || || || || |||||||| || | |
Sbjct 1106595 GAGAATGTGCACTCTGAGATGTACAGCCTACTGATAGACACTTACATCAGTGATCCTGAC 1106536
Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA--GCGG 61441
| || || | ||||| || || || || | || ||| || ||| || |
Sbjct 1106535 CAGCGGGAGTTTCTTTTCAAAGCTATTGAAACTGTCCC--ATGTGTTGCTCAAAAGGCTG 1106478
Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501
| ||||| | || |||| | | | || | | | |||| ||| ||||| | || |
Sbjct 1106477 AATGGGCAATAAACTGGACTGCAAATCCATCAGTCTCTTTTGCCGAAAGATTGATTGCCT 1106418
Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561
|||| || || ||| | |||||| || || || ||||| ||||||||| | || |
Sbjct 1106417 TTGCATGTGTTGAAGGTATCTTTTTCTCAGGCTCTTTCGCCGCTATCTTTTGGCTTAAAA 1106358
Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621
| ||||| || ||||| ||| | || ||| || || | || || || || || ||
Sbjct 1106357 AGCGTGGCCTGATGCCAGGTTTAACTTTCTCTAACGAACTTATCTCTCGAGATGAAGGAT 1106298
Query 61622 TGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGG 61681
| |||||||||||||| |||| |||| ||| ||| | || || | ||| ||
Sbjct 1106297 TACATTGTGATTTTGCCTGTTTGTTATTTAAA---TATGTTGTTAAAAGACCGAGTGAAA 1106241
Query 61682 AGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACG 61741
| | | || || || || || || || ||||| ||| ||||| | || || |
Sbjct 1106240 AAATTATTCAAGAAATAGTGCGAGATGCTGTGGAAATCGAGCAGAAATTTTTAACCGAGG 1106181
Query 61742 CTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTG 61801
| ||||| || || ||||| || ||||| | | ||| | || || ||||| ||||
Sbjct 1106180 CATTGCCAGTTTCTCTCATAGGAATGAACAACAAAATGATGGCCCAATACATTGAGTTTG 1106121
Query 61802 TTGCCGACCGTCTGTTGGTCGATTT 61826
|||| ||| | || |||| || ||
Sbjct 1106120 TTGCAGACAGATTGCTGGTTGAATT 1106096
>seq453
Length=2394413
Score = 237 bits (262), Expect = 1e-57
Identities = 539/805 (67%), Gaps = 13/805 (2%)
Strand=Plus/Minus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
||||| || | | |||||||||| |||||| || ||||||| || |||||| |||
Sbjct 12344 GAACCATTACTTCGAGAGAATCCTAATCGTTTTGTTGTGTTCCCTATTGAGTATCCTGAT 12285
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|||||| ||||| || || || ||||| || |||||||| || || ||||| || ||
Sbjct 12284 ATTTGGGAAATGTATAAGAAAGCTGAAGCCTCGTTCTGGACTGTTGAAGAGGTTGACTTA 12225
Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
|| ||| | | |||||||| ||| ||| ||| | |||| ||||| || |
Sbjct 12224 TCTCGAGATTTAACTGACTGGGCTAAGC--TTAACGAT-GAAGAACGTCATTTTATCAGC 12168
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|||||||||| ||||| | || || |||||||| || ||||| |||||| ||| |
Sbjct 12167 TATGTGTTGGCATTCTTCTCTGCCTCAGACGGTATTGTAAATGAAAATTTAGCTGAAAGA 12108
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
|| | || | || | | || || || ||||| || || || || ||||| ||
Sbjct 12107 TTTATTCGTGATATCCAGATTACCGAAGCTCGATGTTTTTATGGTTTTCAAATTGCGATT 12048
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
|||||||| ||||| ||||||||||| | || || || || |||||||| || | |
Sbjct 12047 GAGAATGTGCACTCTGAGATGTACAGCCTACTGATAGACACTTACATCAGTGATCCTGAC 11988
Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA--GCGG 61441
| || || | ||||| || || || || | || ||| || ||| || |
Sbjct 11987 CAGCGGGAGTTTCTTTTCAAAGCTATTGAAACTGTCCC--ATGTGTTGCTCAAAAGGCTG 11930
Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501
| ||||| | || |||| | | | || | | | |||| ||| ||||| | || |
Sbjct 11929 AATGGGCAATAAACTGGACTGCAAATCCATCAGTCTCTTTTGCCGAAAGATTGATTGCCT 11870
Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561
|||| || || ||| | |||||| || || || ||||| ||||||||| | || |
Sbjct 11869 TTGCATGTGTTGAAGGTATCTTTTTCTCAGGCTCTTTCGCCGCTATCTTTTGGCTTAAAA 11810
Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621
| ||||| || ||||| ||| | || ||| || || | || || || || || ||
Sbjct 11809 AGCGTGGCCTGATGCCAGGTTTAACTTTCTCTAACGAACTTATCTCTCGAGATGAAGGAT 11750
Query 61622 TGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGG 61681
| |||||||||||||| |||| |||| ||| ||| | || || | ||| ||
Sbjct 11749 TACATTGTGATTTTGCCTGTTTGTTATTTAAA---TATGTTGTTAAAAGACCGAGTGAAA 11693
Query 61682 AGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACG 61741
| | | || || || || || || || ||||| ||| ||||| | || || |
Sbjct 11692 AAATTATTCAAGAAATAGTGCGAGATGCTGTGGAAATCGAGCAGAAATTTTTAACCGAGG 11633
Query 61742 CTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTG 61801
| ||||| || || ||||| || ||||| | | ||| | || || ||||| ||||
Sbjct 11632 CATTGCCAGTTTCTCTCATAGGAATGAACAACAAAATGATGGCCCAATACATTGAGTTTG 11573
Query 61802 TTGCCGACCGTCTGTTGGTCGATTT 61826
|||| ||| | || |||| || ||
Sbjct 11572 TTGCAGACAGATTGCTGGTTGAATT 11548
>seq442
Length=7801961
Score = 127 bits (140), Expect = 2e-24
Identities = 597/931 (64%), Gaps = 29/931 (3%)
Strand=Plus/Plus
Query 66007 GGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTC 66066
||| | ||| || || || || ||||| | || ||||| || |||| || ||||||||
Sbjct 3252507 GGCTATAGAGGCAAGATTACAAACAGCAACTTCATCAGGGGCACTATATTCAACAATTTC 3252566
Query 66067 GGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCA 66126
||||||||||| || ||||| || | ||| | ||||| ||| ||| ||
Sbjct 3252567 AGTGCACAGATTTGAACACTTGATGGTTCCAAGATTTTTCTGATTGGACTTTTCATTACA 3252626
Query 66127 TGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTG 66186
||| || || | ||| |||||| || || || | |||| |||||||| || ||
Sbjct 3252627 ATGATCTTTATAAAGCATATACGGAACACCAGTTTCCATCTGGGCATCAATGATTGCTTG 3252686
Query 66187 CCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCG-TTCGTAATGTT--- 66242
||||||||| || || || | | | | | || |||| ||| | || ||
Sbjct 3252687 CCAAAGAGCTCGAGCTTTTATT-TGCTGATTG---TATCTTTTTTCTTCTTCATATTTAA 3252742
Query 66243 CGTAGAGGTGTTCGAAGGATTCACC-CCATA--CTTCGGACAGACATGGACACTTGTGTG 66299
| || || | | ||| |||| | ||||| ||||| | |||| ||||| |||||||
Sbjct 3252743 CATAAAGCTTATTGAA---TTCATCTCCATAAACTTCGAATAGACCAGGACATTTGTGTG 3252799
Query 66300 GACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359
||||||| || ||| |||| | || || || |||||| |||| ||| | ||
Sbjct 3252800 GACACATAAGACTCCACATTTCATCTTTTTTAACTCGCTCCATAAAAAGATTAGGCACCC 3252859
Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAG 66418
| || || | || | ||| || |||| ||| || | || ||| ||||| | |||
Sbjct 3252860 AAAGAGCTAAAAACAAATCTCGAGCTCTCATCTCTTCTTTACCAGTG-TTTTTTCTTAAG 3252918
Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478
||||| ||||||| || |||||||| || || | || || || | | ||
Sbjct 3252919 CATAGGAAATCAAAGACATCAGCATGCCAAGGCTCAATATAAATAGCATAAGCTCCTGGT 3252978
Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATT-GTTGAAGACACGCAACATCGG 66537
||||| || ||||||| ||| || ||||| | ||| || || | || ||| ||
Sbjct 3252979 CGTTT---ACCCCCTTGGTTGACATAACGAGC-AGATTCATTAAACATTTTCAGCATAGG 3253034
Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597
||||| || | ||| ||||| || || ||| ||| |||| || || |||
Sbjct 3253035 CACGAGACCATCAGAGAAACCATTTGTCCCTCTGATTCGGGTTCCTTTCGCTCGAATACA 3253094
Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657
|||||||| |||||||| ||||| || || || || | |||||| || ||
Sbjct 3253095 ATGAACATTGAGACCAATTCCACCAGCATATTTAGAAATCAAATTACAATCTTTCAAAGT 3253154
Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTA---AG 66714
| |||| || ||||| || || | || | | || | | ||||| ||
Sbjct 3253155 ATCGGATATTCCTTCAATACTATCTTCCCTCATTGATAAAAGAAAAC---AACTAGATAG 3253211
Query 66715 TTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCG 66774
|| ||| ||||| | || || ||||| || | ||| || ||||| | | |
Sbjct 3253212 CTGAGGTCGAGGTGTACCAGCATTAAAAAGGGTAGGAGAAGCATGTGTAAACCATTTTTG 3253271
Query 66775 AGACATGTAATT-GTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG 66833
|||||| ||||| ||| |||| | | | | ||||| | |||||||| || | |
Sbjct 3253272 AGACAT-TAATTCGTAGGTCTGTAAGGCTGATTCAATATCAGATCCATGAATTCCAACAG 3253330
Query 66834 CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGT 66893
|| || ||| || | | ||| |||| ||| || | | | ||||| | | | ||
Sbjct 3253331 CAACTCTCATTAGCATATGTTGCGGCCTTTCAACTACTTTACCATTGATTTTAAGAAGGT 3253390
Query 66894 AGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924
| || | ||||| ||| |||| |||||| ||
Sbjct 3253391 ATGATCTTTCCAAGGTTTTGAAACCAAAATA 3253421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397564894124240
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