Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5829 127 4e-27 seq990 98.7 2e-18 >seq5829 Length=1532 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| ||| ||||| | |||| Sbjct 1006 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTCAAAATGCCTGAATATTCTGTGCAT 1065 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 |||||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 1066 GGAATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 1124 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 1125 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 1184 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 1185 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 1243 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 1244 AAAGTTAGAGG 1254 >seq990 Length=1576 Score = 98.7 bits (108), Expect = 2e-18 Identities = 178/251 (71%), Gaps = 12/251 (5%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC---CTTTGCTCGAATA-CATTAGCAT 130 |||||||||| ||||||||||| | ||||||||| ||| ||||| | |||| Sbjct 917 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTCAAAATGCCTGAATATTCTGTGCAT 858 Query 131 GGAATAATAGAATAGGACGTGCGGTTCT-ATTTTGTTGGTTTCTAGGAC-CGCCGTAATG 188 |||||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 857 GGAATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 799 Query 189 ATTAATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| || | ||||| | |||||| | |||||||||||||||||| Sbjct 798 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 739 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||| | | || || |||| ||||||||||||||||| ||||| Sbjct 738 GTCGTAAGACTAAAGA---TGTTGGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 683 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 682 AAAGTTAGAGG 672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914896464768