Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28]
33,166 sequences; 99,885,510 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq7146 347 1e-90
seq15048 298 4e-76
>seq7146
Length=6253
Score = 347 bits (384), Expect = 1e-90
Identities = 463/641 (72%), Gaps = 7/641 (1%)
Strand=Plus/Plus
Query 61195 TTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTA 61254
|||||| || ||| |||| ||||| ||||| || || || || ||||| |||||| |
Sbjct 5310 TTCATTTCGCACGTGCTGGCCTTCTTCGCCGCCTCCGATGGCATTGTCAACGAGAATCTG 5369
Query 61255 TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAG 61314
|||| |||||| || |||||||||||| | |||||||| || |||||||||||||||
Sbjct 5370 GTGGAGCGTTTCAGCCAAGAGGTGCAAGTGACAGAGGCGCGCTGCTTCTACGGCTTCCAG 5429
Query 61315 ATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGG 61374
|| |||||||||||||||||||||||||||||||| |||| || || || |||||||||
Sbjct 5430 ATCGCCATGGAGAATGTCCACTCGGAGATGTACAGCATTCTGATTGACACCTACATCAGG 5489
Query 61375 GAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGG 61434
|| | | | || || |||||||||| |||| || | |||||||| ||| |
Sbjct 5490 GATCCGCATCAGCGGGACTTCCTGTTCAATGCGGTCGAAACATTGCCGGCGGTCAAGAAG 5549
Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494
|| || || ||||| | |||||| || | |||| | || ||||| || |
Sbjct 5550 AAGGCCGACTGGGCGATGGCATGGATCTCCTCGAAGTCGGCCAACTTCGGTGAGCGCATC 5609
Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554
| || || || | |||||||| | || ||| || || ||| | ||||| |||
Sbjct 5610 ATTGCGTTCGCCGCCGTCGAGGGCATTTTCTTCTCGGGCAGTTTCGCCTCGATCTTCTGG 5669
Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614
||||||| || || || |||||||| || |||||| ||| |||||||| |||||||||
Sbjct 5670 CTGAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGTTGATCTCACGCGAC 5729
Query 61615 GAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC- 61673
|||||| ||||||||||||| || || | ||| | | |||||||| | |||||
Sbjct 5730 GAGGGCCTGCATTGTGATTTCGCCTGCCTGATGTTCCAGC---ATCTGGTGCAGCGTCCC 5786
Query 61674 -GTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732
| || || || | ||||| | || ||||| | ||||||||||| || |
Sbjct 5787 AGCCG--CGAACGCATCATCGAGATCATCGACGAAGCGGTGAAGATCGAACAGGAGTTCC 5844
Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792
| || || || |||| ||| | ||||||||||| || ||| ||||| |||| |
Sbjct 5845 TCACCGAAGCGCTGCCGGTCAATTTGATCGGCATGAACTGCAAACTGATGTCCGAGTACA 5904
Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATG 61833
| ||||| || |||||||||||| ||||||| ||||| ||
Sbjct 5905 TCGAATTCGTGGCCGACCGTCTGCTGGTCGAACTGGGTGTG 5945
>seq15048
Length=4365
Score = 298 bits (330), Expect = 4e-76
Identities = 1193/1861 (64%), Gaps = 49/1861 (3%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| |||||||| || || ||||| || || | || || ||||| || ||||| || ||
Sbjct 1286 TCAACCGTGAATTGAATGGCATTCGCTGCTGGTTTAGTTCTAAGGTAATACATTCCAGTT 1345
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197
|| || ||||| ||| ||| ||||||| ||||||| ||| || ||||||| |||||
Sbjct 1346 TTTAGACCAGCTTTCCACGCAAAGAAATGAATCGATGTTAACTTCCCATAATTTGGCTCT 1405
Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257
| ||||| ||||| || ||||| || |||||||| | || | ||| ||||||||
Sbjct 1406 CCAACATGAATATTAAATGACTGGCTTTGATCGATAAATGCTCCTCTATCAGCAGCCATT 1465
Query 65258 TCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316
||| | || | | ||||| ||||| || || ||||| || |||| |
Sbjct 1466 AAAATTGTT-GATTTAACTGATATTTCCCAAACAGTTTTGTAAAGATCCCGTATGTTTTG 1524
Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376
||| || || || | || | |||||||| | | || || || |||
Sbjct 1525 TGGTATACTTTCGATATTTTGAATGGAACCACGGCTAGATATTATTTCGTTTTTCATTTG 1584
Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436
|| ||||||| | | ||| | |||| | | |||||| | || | ||||| ||
Sbjct 1585 TTCATCCCACAAATCTAGTTCGGTTAGATCTCTTAGTAAGTGATGGTTAACCACTTGAAA 1644
Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496
||||| |||| ||| || || || || || ||||| |||||||| ||||| |
Sbjct 1645 TTCGCCCGACAATACTCGCCGCGTGTAAATATTTGACGTATACGGTTCAAAAGATTCGTT 1704
Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556
|| || | ||| || || || ||||| |||||||| || || || | | ||||| |
Sbjct 1705 ATTTCCCAAAATCTGCGCGGTGGATGCTGTTGGCATTGGTGCCACAAGTAGAGAGTTCCT 1764
Query 65557 CAATCCGTTCATTTCA--ATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCG 65614
| || | ||||| || || | || || ||| | ||||| ||| | |
Sbjct 1765 TATACCAT--ATTTCTTTATTTTATTTTTTAAATCAATCCAATCCCACAAA--TTTGTAG 1820
Query 65615 TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGG 65674
|| | | | ||||||||| | ||||| |||| | ||| | || |||
Sbjct 1821 --GAGTTACTCC--CCACATATCATACTGCAGTATTCCCTTGCTGACGGGACTTCCGTCA 1876
Query 65675 AAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAA 65734
| | || || ||| | | || || | ||| || | ||| | |||| |||||
Sbjct 1877 TATGTTTCATATGGTCCAAATTTTTCTGCCAGCTCACAACTTGCCTCCAATGCGCCAAAA 1936
Query 65735 TAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATA 65794
||||| || || || || | ||| | | || | || || || || ||
Sbjct 1937 TAAATTGTTTCAAAGATTTGCTTATTCAAAAGAAACGCGTTCTCACTTTCATAAGGGTAT 1996
Query 65795 CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGC 65854
| ||| | | ||||| ||||||||| |||||||| |||||||| || || | ||| |||
Sbjct 1997 CTCATTAAAATAAAAGCGTCGGCCAGCCCTTGAACACCAATACCAATAGGTCTATGTCGC 2056
Query 65855 AAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAA 65914
||||| || | | || || |||| || || ||||| | ||| || || ||| |||
Sbjct 2057 AAATTCGATTTTTTTGCTTCGGGTAATGGATAATAATTTACATCAATTATTTTATTTAAA 2116
Query 65915 TTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGA 65974
|| || || | | || | |||| || || ||||| ||||
Sbjct 2117 TTCTTGGTGACTATTTTTGTGACCTCTTTTAATTTTTTAAAGTCAAAGACTTTA------ 2170
Query 65975 TCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCT 66034
|| | || ||||||| | | |||| || ||||||||||| || |||
Sbjct 2171 TCCGCTGT---------CACAAACATATTTAAAGCAATCGAAGCGAGGTTGCAAACGGCT 2221
Query 66035 ATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTG 66094
||||| || || || | ||| || |||||||| || || ||||||||||| ||| ||
Sbjct 2222 ATCTCATCTGGTGCCGAATATTCAACAATTTCAGTACATAGATTACTGCATTTTATAGTA 2281
Query 66095 CCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTG 66154
|| | || ||||| || || || | |||||||| ||| ||||| | ||| || || ||
Sbjct 2282 CCGAGGTTTTGTTGGTTGCTTTTTCTATTGCATGAATCTTTGTATAGCATATATGGGGTA 2341
Query 66155 CCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGT 66214
|| || || ||||| | ||| || || || |||||| | | || || || | |
Sbjct 2342 CCTGTTTCCACTTGTGCCTCTATAATCGCAAACCAAAGGGACTGGGCTTTTACTTTTCTA 2401
Query 66215 ACCGCCC-TACCT-TTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC---ACCCC 66269
||| | | ||| || | || || | ||| || | | || || ||| |||||
Sbjct 2402 TTCGCGCGTCCCTCTTTC--TCATATTTTTCATACAAGGTCTCAAA---TTCCGAACCCC 2456
Query 66270 ATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTT 66329
| ||||| || | ||||||||||| || ||||| || |||||||| | | ||
Sbjct 2457 AAACTTCATGCAAGCCAGGACACTTGTGAGGGCACATAAGGGACCAATCTTCGTTAGCTT 2516
Query 66330 CTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTT 66389
| || || |||||| | ||| || ||||| | || || || | ||| || |||| |
Sbjct 2517 CAACTCGTTTCATAAACAAATCGGGAATCCACAAAGCATAAAATAAATCACGAGCTCTAT 2576
Query 66390 GCTCCTCAATG-CCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448
| || || || ||||| ||||| || || | |||||||| || || | |||||
Sbjct 2577 GTTCTTCCTTGCCCGTG-TTTTTCTTTAAATCCAAAAACTCAAAAATATCAGAGTGCCAA 2635
Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508
|| || | |||||| || || | || | ||| ||||| |||||||| ||||||||
Sbjct 2636 GGCTCTAAGTAGATTGCAAAAGCTCCAGGCCTTTTTCCGCCTCCTTGGTCAACGTAGCGG 2695
Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568
|| ||||||||||| || | | ||| || || || |||||||| | ||||| || ||
Sbjct 2696 GCCACATTGTTGAAAACTCTTAGCATTGGCACCAGGCCGTTAGAAGTTCCATTAGTTCCT 2755
Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628
|| | | ||| || ||||| |||||||| | |||||||| || || |
Sbjct 2756 GATATAGATGTGCCTTTAGCTCGTATGCAATGAACATTTATTCCAATACCTCCAGCTGAT 2815
Query 66629 TTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTG 66688
|| || || ||| || | | |||| || || || ||||| || || |
Sbjct 2816 TTAGATATCATAGCGCATTGTTCAACTGATTTAAAAATACCTTCAATTGAATCTGCAACC 2875
Query 66689 ATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTG 66748
|| || || ||| |||| || |||||| ||| ||| || || | || || ||
Sbjct 2876 ATTGTAAGTAGGAAGCAAGATGAAAGTTGCGGTCGAATTGTTGCAGCAGCAAAAAGTGTC 2935
Query 66749 GGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCA 66808
|||| || |||||||| | |||| || ||||| || || || | | |||
Sbjct 2936 GGTGATGCATGCGTAAAAAATCTTTCCGACAGATAGTTGTAGGTTTCAATTGCGGAATCT 2995
Query 66809 ATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867
|| | || |||||||| || | | ||| | ||||| | || ||||| | ||| |
Sbjct 2996 ATATCATCACCATGAATACCTATAGACAC-CCTCATCAACATGTGCTGAGGTCTTTCAGC 3054
Query 66868 CA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGT 66923
| |||| ||||| | || ||| || || ||||| || || || | ||||| |
Sbjct 3055 GATTTTGCCG----TTGATTTTCAATAAATAAGACCGTTCAAGTGTTTTAAATCCAAAAT 3110
Query 66924 A 66924
|
Sbjct 3111 A 3111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397407298790240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |