Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_026254.1 Length=2234 Score E Sequences producing significant alignments: (Bits) Value seq14893 87.8 3e-14 >seq14893 Length=1640 Score = 87.8 bits (96), Expect = 3e-14 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 1663 TCTCTTCCATCAACATCTCCTCCGACGAAAGTGATTCCGTCTGGTGTGGCATAGACGGGA 1722 |||| |||||||||||||| || || || |||||| || || ||||||||||| Sbjct 1450 TCTCGACCATCAACATCTCCGCCAACAAATTCGATTCCTCGCGGGGTCTCATAGACGGGA 1509 Query 1723 GGCACAGGAGCGAACTTCCAGTCACAGTACTTTTGAAGTTGGGTGAAAGAACAAGCCGCG 1782 ||| || || |||| || |||||| || || | |||||||||| || Sbjct 1510 GGCTTGACCGCAAATCTCCATTCGGCGTACTTGGCCAGCTGCCCGTAAGAACAAGCAGCA 1569 Query 1783 CTCTTTGGATCCAATTCATGGACCAAATCCCAAAACGACTCTCGATCGCTCGCACCCGTG 1842 |||| ||||||| | ||| |||| |||||||| ||||| |||| |||| |||| Sbjct 1570 GTCTTGGGATCCAGGTGATGAACCAGTTCCCAAAAATGGTCTCGGTCGCGTGCACACGTG 1629 Query 1843 ATCGCAGCCCA 1853 ||| ||| ||| Sbjct 1630 ATCTCAGTCCA 1640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7037519183200