Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_026317.1 Length=2485 Score E Sequences producing significant alignments: (Bits) Value seq27235 96.9 5e-17 >seq27235 Length=1167 Score = 96.9 bits (106), Expect = 5e-17 Identities = 113/150 (75%), Gaps = 12/150 (8%) Strand=Plus/Minus Query 528 ATGCTGAACGGATTTTTTACACAGTTCAGGAAATTCAAGTACGCAGGAGCGGATGTTA-- 585 ||||| | ||||| | || ||||| | ||||||||||||| | ||| |||| Sbjct 941 ATGCTTAGAGGATTCTGGACTCAGTTTAAGAAATTCAAGTAC-----AACGGTTGTTCTA 887 Query 586 ---CCCTCGTTCCTGTCTCTACTCTT-CCGGCTGACCCTCTGCAGATTTCATATGAAGCG 641 |||| ||||||| || | || || || |||||| | ||| ||||||||||||| Sbjct 886 TCTCCCTTGTTCCTG-CTGCGCAGTTGCCCGCAGACCCTTTACAGGTTTCATATGAAGCA 828 Query 642 GGCGAGCCTACTATCGACCCTCGTGATATG 671 |||||||| ||||||||||||||||||||| Sbjct 827 GGCGAGCCGACTATCGACCCTCGTGATATG 798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7840436144556