Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_030141.1 Length=2247 Score E Sequences producing significant alignments: (Bits) Value seq14893 80.6 4e-12 >seq14893 Length=1640 Score = 80.6 bits (88), Expect = 4e-12 Identities = 108/149 (72%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 1711 GGGTGCTCATACACGGGAGGGTCAGGCGCAAATCTCCAGTCCGCGTACTTGCTGAGTTGG 1770 |||| |||||| |||||||| | |||||||||||| || ||||||||| || || Sbjct 1493 GGGT-CTCATAGACGGGAGGCTTGACCGCAAATCTCCATTCGGCGTACTTGGCCAGCTGC 1551 Query 1771 GTGAAAGAAGTTGCTGCAGCCTTTGGATCAAGCTCGTGACACAGTTCCCAAAACTGTTCT 1830 | ||||| || |||| ||| ||||| || | ||| |||||||||||| || ||| Sbjct 1552 CCGTAAGAACAAGCAGCAGTCTTGGGATCCAGGTGATGAACCAGTTCCCAAAAATGGTCT 1611 Query 1831 CGATTCTCAGCCTGCGTGATCGCAGTCCA 1859 || | || ||||||| ||||||| Sbjct 1612 CGGTCGCGTGCACACGTGATCTCAGTCCA 1640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7079104523828