Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_030142.1 Length=2125 Score E Sequences producing significant alignments: (Bits) Value seq14893 80.6 4e-12 >seq14893 Length=1640 Score = 80.6 bits (88), Expect = 4e-12 Identities = 77/96 (80%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 1647 AGCTGTCCGAAAGAGCACGCTGCACTTTTTGGATCCAGCAGGTGAACCAGTTCCCAAAAC 1706 ||||| ||| |||| || || ||| | || |||||||| | ||||||||||||||||| Sbjct 1546 AGCTGCCCGTAAGAACAAGCAGCAGTCTTGGGATCCAGGTGATGAACCAGTTCCCAAAAA 1605 Query 1707 TCGTCTCGAT-TCGTCGCACTCGTAATCTCAGTCCA 1741 | |||||| | ||| |||| ||| ||||||||||| Sbjct 1606 TGGTCTCGGTCGCGT-GCACACGTGATCTCAGTCCA 1640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6688842096396