Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq6497 109 2e-19 >seq6497 Length=13545 Score = 109 bits (120), Expect = 2e-19 Identities = 128/171 (75%), Gaps = 4/171 (2%) Strand=Plus/Minus Query 30105 TACACGCTTGCACCATCACGCAGCTTTGCTGATGCAGTTCTGCATAACTGGCTTATTACC 30164 |||||||| |||||||| || ||||||||||| || |||| | ||| | |||||| Sbjct 11833 TACACGCTCAGGCCATCACGGAGTTTTGCTGATGCCGTATTGCACACATGGTTAATTACC 11774 Query 30165 GCTGG--AAATCCAGAAAACACGATCGACATAGTGAAGCTGTATGAAATTGCCGACAGCC 30222 || || ||| | |||| | |||||||| | ||| ||| |||| ||| ||| Sbjct 11773 GCAGGTGAAAGCGAGAAGAAT--ATCGACATCGACGGGCTATATCGAATTTACGATAGCT 11716 Query 30223 TGCCTGATGAGCGACTTGGTTGTTTCGACTATACATTCGATGATGAAGATA 30273 |||||||||||||||| |||| ||||| || |||||||| ||||| |||| Sbjct 11715 TGCCTGATGAGCGACTAGGTTACTTCGATTACACATTCGACGATGAGGATA 11665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144915703006368