Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13]
12,736 sequences; 1,042,628,579 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq7322 401 9e-110
seq1383 187 4e-45
seq532 181 2e-43
seq5176 131 3e-28
seq12 118 2e-24
>seq7322
Length=3513
Score = 401 bits (444), Expect = 9e-110
Identities = 245/256 (96%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 3322 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 3265
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3264 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 3205
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3204 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 3145
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 3144 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 3085
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 3084 GCCATAGTCCCTCTAA 3069
>seq1383
Length=91128
Score = 187 bits (206), Expect = 4e-45
Identities = 202/258 (78%), Gaps = 11/258 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||| |
Sbjct 43157 GTACAAAGGGCAGGGACATAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 43100
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | | ||||||||| | ||||| | ||| | | | || || | ||
Sbjct 43099 CTCGTTCATGGGGATCAATTGCAAGCCCCAATCCCTAGCACAAAGGACGTTAAATGTGTT 43040
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| | |||| || || | ||| || ||| | | ||||||||| || ||||||
Sbjct 43039 ACCCGGTCGGTTCGGACAGGGAG---GACGCGCTGATTCCTTCAGTGTAGTGCACGTGCG 42983
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238
||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| |
Sbjct 42982 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 42926
Query 239 AGGC-CATCTCCCTCGAA 255
|| | | | |||||| ||
Sbjct 42925 AGCCGCCTGTCCCTCTAA 42908
>seq532
Length=192510
Score = 181 bits (200), Expect = 2e-43
Identities = 179/226 (79%), Gaps = 7/226 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||| ||||| ||||||||||||| |||||| |||||| || |||||| |
Sbjct 107464 GTACAAATGGCAGGAACGTAATCAACGCGAGCTT-ATGACTTGCGCTTGCTGGGAATT-C 107407
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
|||||| | | ||||||||||| | ||||| | ||||| | | ||||| || ||
Sbjct 107406 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAACAGGTT 107347
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| || || |||| || || | ||| || ||| | | |||||||||||| |||| |
Sbjct 107346 ACCAGGTCCGTTCGGACAGGGAG---GACACGCTGATTCCTTCAGTGTAGCGCACGTGTG 107290
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||||||||||| ||||||||||||||||||||| ||||| ||
Sbjct 107289 GCCCAGAACATCTATGGGCATCACAGACCTGTTATTK-CTCAATCT 107245
>seq5176
Length=13017
Score = 131 bits (144), Expect = 3e-28
Identities = 143/184 (78%), Gaps = 7/184 (4%)
Strand=Plus/Minus
Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTC 132
||||||||||| | ||||| | ||||| | | ||||| | |||||||| || ||
Sbjct 11125 AACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAACGGGTTACCCGGTCCGTTC 11066
Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192
|| || || | ||| || ||| | | ||||||||||||||||||||||||||||||||
Sbjct 11065 GGACAGGGAG---GACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 11009
Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGC-CATCTCCCT 251
|||| ||||||||||||||||||| ||||| ||| | || ||| ||| | | | |||||
Sbjct 11008 AAGGCCATCACAGACCTGTTATTG-CTCAATCTTGTGCGG-CTAGAAGCCGCCTGTCCCT 10951
Query 252 CGAA 255
| ||
Sbjct 10950 CTAA 10947
>seq12
Length=46368093
Score = 118 bits (130), Expect = 2e-24
Identities = 131/168 (78%), Gaps = 9/168 (5%)
Strand=Plus/Minus
Query 91 ATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACT 149
||||| | ||||| | | ||||| | |||||||| || |||| || || | |||
Sbjct 24068593 ATCCCTAGCACGAAGGAGGTTCAACGGGTTACCCGGTCCGTTCGGACAGGGAG---GACA 24068537
Query 150 CGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 209
|| ||| | | ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 24068536 CGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGAATCACAGACCT 24068477
Query 210 GTTATTGCCTCAAACTTCCGTG-GCCTAAAAGGC-CATCTCCCTCGAA 255
| ||||| ||||| || |||| | ||| ||| | | | |||||| ||
Sbjct 24068476 GCTATTG-CTCAATCT--CGTGCGGCTAGAAGCCGCCTGTCCCTCTAA 24068432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751907218240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |