Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq7322 401 9e-110 seq1383 187 4e-45 seq532 181 2e-43 seq5176 131 3e-28 seq12 118 2e-24 >seq7322 Length=3513 Score = 401 bits (444), Expect = 9e-110 Identities = 245/256 (96%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 3322 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 3265 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3264 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 3205 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 3204 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 3145 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 3144 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 3085 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 3084 GCCATAGTCCCTCTAA 3069 >seq1383 Length=91128 Score = 187 bits (206), Expect = 4e-45 Identities = 202/258 (78%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||| | Sbjct 43157 GTACAAAGGGCAGGGACATAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 43100 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | | ||||||||| | ||||| | ||| | | | || || | || Sbjct 43099 CTCGTTCATGGGGATCAATTGCAAGCCCCAATCCCTAGCACAAAGGACGTTAAATGTGTT 43040 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| | |||| || || | ||| || ||| | | ||||||||| || |||||| Sbjct 43039 ACCCGGTCGGTTCGGACAGGGAG---GACGCGCTGATTCCTTCAGTGTAGTGCACGTGCG 42983 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 42982 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 42926 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 42925 AGCCGCCTGTCCCTCTAA 42908 >seq532 Length=192510 Score = 181 bits (200), Expect = 2e-43 Identities = 179/226 (79%), Gaps = 7/226 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||| ||||| ||||||||||||| |||||| |||||| || |||||| | Sbjct 107464 GTACAAATGGCAGGAACGTAATCAACGCGAGCTT-ATGACTTGCGCTTGCTGGGAATT-C 107407 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 |||||| | | ||||||||||| | ||||| | ||||| | | ||||| || || Sbjct 107406 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAACAGGTT 107347 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| || || |||| || || | ||| || ||| | | |||||||||||| |||| | Sbjct 107346 ACCAGGTCCGTTCGGACAGGGAG---GACACGCTGATTCCTTCAGTGTAGCGCACGTGTG 107290 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||||| ||||||||||||||||||||| ||||| || Sbjct 107289 GCCCAGAACATCTATGGGCATCACAGACCTGTTATTK-CTCAATCT 107245 >seq5176 Length=13017 Score = 131 bits (144), Expect = 3e-28 Identities = 143/184 (78%), Gaps = 7/184 (4%) Strand=Plus/Minus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTC 132 ||||||||||| | ||||| | ||||| | | ||||| | |||||||| || || Sbjct 11125 AACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAACGGGTTACCCGGTCCGTTC 11066 Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 || || || | ||| || ||| | | |||||||||||||||||||||||||||||||| Sbjct 11065 GGACAGGGAG---GACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 11009 Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGC-CATCTCCCT 251 |||| ||||||||||||||||||| ||||| ||| | || ||| ||| | | | ||||| Sbjct 11008 AAGGCCATCACAGACCTGTTATTG-CTCAATCTTGTGCGG-CTAGAAGCCGCCTGTCCCT 10951 Query 252 CGAA 255 | || Sbjct 10950 CTAA 10947 >seq12 Length=46368093 Score = 118 bits (130), Expect = 2e-24 Identities = 131/168 (78%), Gaps = 9/168 (5%) Strand=Plus/Minus Query 91 ATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACT 149 ||||| | ||||| | | ||||| | |||||||| || |||| || || | ||| Sbjct 24068593 ATCCCTAGCACGAAGGAGGTTCAACGGGTTACCCGGTCCGTTCGGACAGGGAG---GACA 24068537 Query 150 CGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 209 || ||| | | ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 24068536 CGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGAATCACAGACCT 24068477 Query 210 GTTATTGCCTCAAACTTCCGTG-GCCTAAAAGGC-CATCTCCCTCGAA 255 | ||||| ||||| || |||| | ||| ||| | | | |||||| || Sbjct 24068476 GCTATTG-CTCAATCT--CGTGCGGCTAGAAGCCGCCTGTCCCTCTAA 24068432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751907218240