Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq11070 232 3e-58 seq6 125 3e-26 seq7 107 8e-21 >seq11070 Length=1101 Score = 232 bits (256), Expect = 3e-58 Identities = 224/281 (80%), Gaps = 9/281 (3%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT--GTCAAA 465 ||||||||| ||||||||||||||||||| |||| | ||||||| ||| || ||| Sbjct 1101 CCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCCAGT-AAA 1043 Query 466 CCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGT-GAGGGT-GCACCATCGAC 522 ||||| | ||||| ||| ||| || || || ||| | | |||| ||||| |||| Sbjct 1042 CCCGTAAGGCGTAAGGAAGCTGACTGGCGG---GATCCCCTAGCGGGTTGCACCGCCGAC 986 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||| | |||| | | || || || |||| ||||||| |||| ||||||||||||||| Sbjct 985 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATG 926 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | Sbjct 925 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 866 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 865 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 825 >seq6 Length=23341858 Score = 125 bits (138), Expect = 3e-26 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||||||| |||||||||||||||||||||| ||| ||| ||| |||||| ||| Sbjct 1448150 GTTGGGACCGGAAAGATGGTGAACTATGCCTGGCCAGGACAAAGTCAGGGGAAACCCTGA 1448091 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| || |||| ||||| ||||||||||||||||| | ||||||||||||||| Sbjct 1448090 TGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAGCTGGGTATAGGGGCGA 1448032 >seq7 Length=109384913 Score = 107 bits (118), Expect = 8e-21 Identities = 96/119 (81%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| ||||||| |||||||||||||||||| ||| |||| ||| |||||| ||| Sbjct 41530733 GTTGGAACCCGAA-GATGGTGAACTATGCCTGGCCAGGACGAAGTCAGGGGAAACCCTGA 41530675 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||| || | || || ||||||| | ||||||| | ||||||||||||||| Sbjct 41530674 TGGAGGTTCGTAGTGATTTTGACGTGCAATTTGATCGTCGGAGCTGGGTATAGGGGCGA 41530616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079726812800