Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13]
12,736 sequences; 1,042,628,579 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq11070 232 3e-58
seq6 125 3e-26
seq7 107 8e-21
>seq11070
Length=1101
Score = 232 bits (256), Expect = 3e-58
Identities = 224/281 (80%), Gaps = 9/281 (3%)
Strand=Plus/Minus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT--GTCAAA 465
||||||||| ||||||||||||||||||| |||| | ||||||| ||| || |||
Sbjct 1101 CCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCCAGT-AAA 1043
Query 466 CCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGT-GAGGGT-GCACCATCGAC 522
||||| | ||||| ||| ||| || || || ||| | | |||| ||||| ||||
Sbjct 1042 CCCGTAAGGCGTAAGGAAGCTGACTGGCGG---GATCCCCTAGCGGGTTGCACCGCCGAC 986
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| ||||||| |||| |||||||||||||||
Sbjct 985 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATG 926
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 925 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 866
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 865 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 825
>seq6
Length=23341858
Score = 125 bits (138), Expect = 3e-26
Identities = 99/119 (83%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
||||||||| |||||||||||||||||||||| ||| ||| ||| |||||| |||
Sbjct 1448150 GTTGGGACCGGAAAGATGGTGAACTATGCCTGGCCAGGACAAAGTCAGGGGAAACCCTGA 1448091
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| || |||| ||||| ||||||||||||||||| | |||||||||||||||
Sbjct 1448090 TGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAGCTGGGTATAGGGGCGA 1448032
>seq7
Length=109384913
Score = 107 bits (118), Expect = 8e-21
Identities = 96/119 (81%), Gaps = 1/119 (1%)
Strand=Plus/Minus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
||||| ||||||| |||||||||||||||||| ||| |||| ||| |||||| |||
Sbjct 41530733 GTTGGAACCCGAA-GATGGTGAACTATGCCTGGCCAGGACGAAGTCAGGGGAAACCCTGA 41530675
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| ||| || | || || ||||||| | ||||||| | |||||||||||||||
Sbjct 41530674 TGGAGGTTCGTAGTGATTTTGACGTGCAATTTGATCGTCGGAGCTGGGTATAGGGGCGA 41530616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079726812800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |