Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq4487 300 4e-79 >seq4487 Length=19373 Score = 300 bits (332), Expect = 4e-79 Identities = 234/279 (84%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||| ||| | || ||||||||| |||| | ||||||||| Sbjct 13186 CGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGTGATGTTGGAGACAGT 13245 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 13246 GGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 13305 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 |||||||||| | ||||||||||||||||||| |||||||| || ||||||| || Sbjct 13306 TTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAGAGCTT-GC---- 13360 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||| | ||||||||||| ||||||||||||||||| ||||||||| ||||||| Sbjct 13361 ----ACCCCTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTT 13416 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 |||||||||||||| ||||||||||| ||||||||||| Sbjct 13417 ACGTGTTTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGC 13455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260639424512