Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8295 412 6e-113 seq4 286 6e-75 seq7 194 3e-47 seq2 95.1 2e-17 >seq8295 Length=1845 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 791 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 733 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 732 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 673 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 672 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 613 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 612 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 553 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 552 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 500 >seq4 Length=10813142 Score = 286 bits (316), Expect = 6e-75 Identities = 230/274 (84%), Gaps = 3/274 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||||| | || || || | |||||| ||||||||||||||||||||||||| |||| Sbjct 5222519 TACTAAGCAGGATCACTATCGTGGCGACAAGTCATCAGTAGGGTAAAACTAACCTATCTC 5222460 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | || |||||||| |||| |||||| ||||||| |||| |||||||||| |||||| | Sbjct 5222459 ACGATGGTCTAAATCCAGATCACGTCCCCTATTGGTGGATGAACAATCCGACGCTTGGCA 5222400 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| || ||||||||||| ||||||||||||| |||||| |||| ||| Sbjct 5222399 AATTTTGCTTCGCAATTATAGGAAGAGCTGACATCGAAGGATAAAAAAGTGACGTTACTA 5222340 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 5222339 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCT-TAC 5222281 Query 240 TCAAATTTC-GAGGGACTAAAGGATCGATAGGCC 272 | ||||||| | | |||||||||| ||||| Sbjct 5222280 TGAAATTTCTTCAAGCCAAAAGGATCGACAGGCC 5222247 >seq7 Length=109384913 Score = 194 bits (214), Expect = 3e-47 Identities = 180/228 (79%), Gaps = 9/228 (4%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||| || ||||| || ||||||| ||||||||||||||||||| Sbjct 83590707 TACTGAGCACGATTACTATCACAGCGACAAGTTATCAGTATGGTAAAACTAACCTGTCTC 83590648 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||| ||| | |||||||||||||| | | ||||||||||| | |||| || Sbjct 83590647 ACGACGGTCTAAGCCCGGTTCACGTTCCCTATTGGCGAGTGAACAATCCGATGCTTGACG 83590588 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||| | |||||||||| ||||||||||||||||||| || ||||||||| Sbjct 83590587 AATTCTGCTCTGCAATGATAGGAAATTCCGACATCGAAGGATCAAACAGTGACGTCGCTA 83590528 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 227 ||||| |||| | ||| ||||||||||||||||||||| Sbjct 83590527 TGAACCCTTGTCCTTTACA--------ATCCCTGTGGTAACTTTTCTG 83590488 >seq2 Length=39772498 Score = 95.1 bits (104), Expect = 2e-17 Identities = 69/79 (87%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||| |||||||||||||||||||||| | |||||||| | ||||| ||||| ||| Sbjct 38866061 GTCATCAATAGGGTAAAACTAACCTGTCTC--GGCGGTCTAACCTCAGCTTACGTTACCT 38866004 Query 90 ATTAGTGGGTGAACAATCC 108 ||| ||| ||||||||||| Sbjct 38866003 ATTGGTGTGTGAACAATCC 38865985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854291183616