Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq4487 356 8e-96 >seq4487 Length=19373 Score = 356 bits (394), Expect = 8e-96 Identities = 415/550 (75%), Gaps = 9/550 (2%) Strand=Plus/Plus Query 56 ATTCGGAGTTTGGTT-GATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGCTCT 113 ||||||||||||||| ||||| |||||| | || |||||||| | |||||||||||| Sbjct 14201 ATTCGGAGTTTGGTTAGATTT-GGTAAGATGATGAATCCCCCTAGTCTATCCAGTGCTCT 14259 Query 114 ACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATC 173 ||| || || | ||| | ||||| |||||||| |||||| |||||||||||||| Sbjct 14260 ACCCCCAACAACATACATACAACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCTATT 14319 Query 174 ACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAA 233 | ||||||||||||||||||||||||| |||| |||||| | | || |||| | | Sbjct 14320 TCCAAGTTTGATTGGCCTTTCACCCCTAATCACAACTCATCCAATAATGTTGCAACATTA 14379 Query 234 GTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACT 293 |||||| |||| || || ||||| |||||| ||| |||| ||||||||| Sbjct 14380 ACTGGTTCGATCCTTCAGTATGTTTTACCATACCTTCAATCTGGTCATGACTAGATCACT 14439 Query 294 TCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGC 353 | | ||||||||| | | ||| | ||||||||||| |||| |||||||||||| | Sbjct 14440 TGGTTTCGGGTCTAATCCATAAAACTAA-ACGCCCTATTCAGACTTGCTTTCGCTACGCC 14498 Query 354 TACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGG 413 ||| || ||| |||| || || || | || ||||| | | |||| | ||||||| Sbjct 14499 TACACCTACCGGCTTAAGCTTGCTTCATAGATTAA-CTCGCTGACCCATTATGCAAAAGG 14557 Query 414 CACGCCGTCAC-CTGG-TACC--TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACAT 469 |||| ||||| || || | |||| | | |||||| || | ||||| |||| | Sbjct 14558 TACGCTGTCACTCTAAATATCAATAAATTGATATAGAGCTCCAACTGTTTGTAAGCACTT 14617 Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 | |||||| | |||||||||||||| || ||||| ||||||||||||||||||||||||| Sbjct 14618 GATTTCAGATTCTATTTCACTCCCCTCCTGGGGTTCTTTTCACCTTTCCCTCACGGTACT 14677 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 ||| | ||||||||| ||||||||||||||||| || ||||||| ||| ||||| | Sbjct 14678 TGTTCACTATCGGTCGTTAAGGAGTATTTAGGCTTGGAGGATGGTCCCCCCATATTCAAA 14737 Query 590 CGAAATTTCA 599 | |||||| Sbjct 14738 CAGGATTTCA 14747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817368510464