Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq4487 279 8e-73 >seq4487 Length=19373 Score = 279 bits (308), Expect = 8e-73 Identities = 226/274 (82%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 || ||||| ||| ||||| |||| |||||| ||||||| || | || ||||| ||||| Sbjct 12460 GAAGAGGGTTTCTTGCTTATATGCTTTCAGCAATTATCCCATCTATACATAGCTACCCAG 12519 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | |||| |||||| ||| ||||| |||||||||| | |||||| |||||||||||||| Sbjct 12520 CGATGCTATTGGCATAACAGCTGGTACACCAGAGGTATATCCATCTCGGTCCTCTCGTAC 12579 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || | ||| || ||||||||||||| | |||||| | ||||| ||||||||||||| | Sbjct 12580 TAGAGTCAGATCTTCTCAAATTTCCTTCACCCACGGCAGATAGAAACCGAACTGTCTCAC 12639 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||| ||| ||| | ||||||| ||||||||||| ||||||||||||| Sbjct 12640 GACGTTCTAAACCCAACTCACGTAACACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 12699 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || ||| |||||||| Sbjct 12700 TTCTCCAGCCCCAGGATGTGATGAGTCGACATCG 12733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780703664896