Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq4487 196 9e-48 >seq4487 Length=19373 Score = 196 bits (216), Expect = 9e-48 Identities = 241/323 (75%), Gaps = 16/323 (5%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || |||| || |||||||||||||| | | |||||||||||||||| | || ||||||| Sbjct 15099 AGAGCACTTGATGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATA 15040 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||||| ||| | | | |||| | |||||||||||||||||||||||||||||||| | Sbjct 15039 AGCTGTGGGAAAT-TGTCAACAAATTTTGATCCGCAGATTTCCGAATGGGGAAACCCAAC 14981 Query 121 --CCTTTG--GGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTG 176 ||| | || ||| || |||| || |||| ||||| ||| || |||||| Sbjct 14980 TAGCTTAGCTAGTTATT--AT-----ATAC-TAAGTATATAAAGCAAACTTGGTGAACTG 14929 Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 ||| ||||||||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct 14928 AAATATCTAAGTAGCCAAAGGAAAAGAAATCAACCGAGATTCTGTTAGTAGTGACGAGCG 14869 Query 237 AAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAG 296 ||| ||| || || | ||| ||| | | |||| |||||||||| | | Sbjct 14868 AAAGCGGAAAAGGCT---AGTGATTTAAAAATAAGAATTAGAATACTCTGGAAATGGTAA 14812 Query 297 CCATAGCGGGTGATAGCCCCGTA 319 |||||| |||||||| || ||| Sbjct 14811 CCATAGAAGGTGATAGTCCTGTA 14789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918283032576