Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13]
12,736 sequences; 1,042,628,579 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq8295 598 1e-168
seq7559 269 9e-70
seq1861 196 2e-47
seq2977 179 1e-42
seq4015 170 6e-40
seq2314 165 3e-38
seq1126 156 1e-35
seq229 156 1e-35
seq2 156 1e-35
seq902 154 5e-35
seq5 149 2e-33
seq8 143 9e-32
seq376 138 4e-30
seq3841 136 1e-29
seq801 134 5e-29
seq2147 125 2e-26
seq7 120 1e-24
seq2608 114 4e-23
seq1402 114 4e-23
seq100 114 4e-23
seq4 95.1 4e-17
seq202 86.0 2e-14
seq6 84.2 7e-14
seq10 80.6 9e-13
>seq8295
Length=1845
Score = 598 bits (662), Expect = 1e-168
Identities = 417/468 (89%), Gaps = 7/468 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 466 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 407
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || |||| |||
Sbjct 406 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGAATC 347
Query 127 GGCCCGC-GAAGGA--CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCA 182
||||||| |||| | |||| ||| ||| | || | ||| || ||||| ||||
Sbjct 346 GGCCCGCCGAAGCAGGCCTTGGGTCCAAAAAGAGGGGCAGTGCC--CCGCTTCCGATTCA 289
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCC 241
|| ||||||||| |||| ||| ||||||||||||||||| ||||| | |||||||
Sbjct 288 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCC 229
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 228 ACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 169
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 168 TCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGT 109
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 108 AGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 49
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCG 469
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 48 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCG 1
>seq7559
Length=3208
Score = 269 bits (298), Expect = 9e-70
Identities = 157/161 (98%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 359 AGTAGATAGGGACAGT-GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 161 AGTAGATAGGGACAGAAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 102
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 101 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCT 42
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518
||||||||||||| |||||||||||||||||||||||||||
Sbjct 41 TGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAAT 1
>seq1861
Length=69843
Score = 196 bits (216), Expect = 2e-47
Identities = 126/138 (91%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
||||||||| | |||||||||| |||| |||||||||||| |||||| |||||||||||
Sbjct 47421 AACAGGGTCGTTTTTCCCCGCTAATTCTCCCAAGCCCGTTCTCTTGGCAGTGGTTTCGCT 47362
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
||| ||||||||||||||| |||||| | |||||||||||||||||| ||||||||||||
Sbjct 47361 AGAAAGTAGATAGGGACAGAGGGAATTTAGTTAATCCATTCATGCGCATCACTAATTAGA 47302
Query 415 TGACGAGGCATTTGGCTA 432
||||||||||||||||||
Sbjct 47301 TGACGAGGCATTTGGCTA 47284
>seq2977
Length=40782
Score = 179 bits (198), Expect = 1e-42
Identities = 159/197 (81%), Gaps = 10/197 (5%)
Strand=Plus/Minus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCG------AAACGGCT 238
|| |||||||| ||||||| | ||| ||||||||||| || || | || ||
Sbjct 14992 GAGTAAGTAAAGAAACGATGAAAGTATTGGTATTTCACCGTCGGCGGGTATTAGCCGTCT 14933
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT--CGGACTAGAGTCAAGCTCAA 296
||||||||| |||||| |||| ||| | || | ||| | ||||||||||||||||||
Sbjct 14932 CCCACTTATGCTACACAACTCATGTC--TCCATACAGTGCCAGACTAGAGTCAAGCTCAA 14875
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||
Sbjct 14874 CAGGGTCTTCTTTCCCCGCTAATTTTCCCAAGCCCGTTTCCTTGGCAGTGGTTTCGCTAG 14815
Query 357 ATAGTAGATAGGGACAG 373
| |||||||||||||||
Sbjct 14814 AAAGTAGATAGGGACAG 14798
>seq4015
Length=24543
Score = 170 bits (188), Expect = 6e-40
Identities = 157/198 (79%), Gaps = 12/198 (6%)
Strand=Plus/Minus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCG------AAACGGCT 238
|| |||||||| ||||||| | |||||| |||||||| || || | || ||
Sbjct 7270 GAGTAAGTAAAGAAACGATGAAAGTAGTGATATTTCACCGTCGGCGGGTATTAGCCGTCT 7211
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTC---ACAAAGTCGGACTAGAGTCAAGCTCA 295
| |||||| |||||||||||| ||||| |||| | | |||||||||||||||||
Sbjct 7210 CTTACTTATGCTACACCTCTCAT---ATTTCCTTACAATGCCAGACTAGAGTCAAGCTCA 7154
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
|||| |||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct 7153 ACAGAGTCTTCTTGCCCCGCTAATTATCCCAAGCCCGTTCCCTTGGCAGTGGTTTCGCTA 7094
Query 356 GATAGTAGATAGGGACAG 373
|| ||||||||||||||
Sbjct 7093 GAATGTAGATAGGGACAG 7076
>seq2314
Length=56518
Score = 165 bits (182), Expect = 3e-38
Identities = 94/96 (98%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 39325 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTGACA 39384
Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||
Sbjct 39385 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 39420
Score = 127 bits (140), Expect = 7e-27
Identities = 74/75 (99%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAG-TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 37501 AGTAGATAGGGACAGATGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 37560
Query 418 CGAGGCATTTGGCTA 432
|||||||||||||||
Sbjct 37561 CGAGGCATTTGGCTA 37575
>seq1126
Length=99389
Score = 156 bits (172), Expect = 1e-35
Identities = 150/191 (79%), Gaps = 8/191 (4%)
Strand=Plus/Plus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCGCCG-----AAACGGC 237
|| |||||||| ||||||| | ||||||||||||||| ||| || | || || |
Sbjct 38643 GAGTAAGTAAAGAAACGATTAAAGTAGTGGTATTTCACCGTTG-GCGGGTATTAACCGTC 38701
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||||||||| |||||| ||| | ||| | ||| | | ||||| |||||||||||||
Sbjct 38702 TCCCACTTATGCTACACYTCTAATGTCTCCTTACAGTGCCAGACTAAAGTCAAGCTCAAC 38761
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||| ||||||||||||||| ||| ||||||||||| | || || || ||||||| |||
Sbjct 38762 AGGATCTTCTTTCCCCGCTTATTTTCCCAAGCCCGTTTCTTTTGCAGTAGTTTCGCCAGA 38821
Query 358 TAGTAGATAGG 368
||||||||||
Sbjct 38822 AAGTAGATAGG 38832
>seq229
Length=312185
Score = 156 bits (172), Expect = 1e-35
Identities = 149/191 (78%), Gaps = 6/191 (3%)
Strand=Plus/Minus
Query 189 AAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCG------AAACGGCTCCCA 242
||||||| ||||||| | |||||||||||||| | | | || ||||||
Sbjct 6269 AAGTAAAGAAACGATGAAATTAGTGGTATTTCACCGTCAGTGGGTATTAGCCGTCTCCCA 6210
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
||||| |||||||| ||| ||| | ||| | | ||||| |||||||||||||||| |
Sbjct 6209 CTTATGCTACACCTATCATGTCTCCTTACAGTGCCAGACTATAGTCAAGCTCAACAGGAT 6150
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||| |||| ||| ||||||||||| ||||||| |||||||| ||||| ||||
Sbjct 6149 CTTCTTTCCTCGCTAATTTTCCCAAGCCCGTTTCCTTGGCAGTGGTTTCTCTAGAAAGTA 6090
Query 363 GATAGGGACAG 373
|||||||||||
Sbjct 6089 GATAGGGACAG 6079
>seq2
Length=39772498
Score = 156 bits (172), Expect = 1e-35
Identities = 151/194 (78%), Gaps = 7/194 (4%)
Strand=Plus/Minus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA------CGGCT 238
|| |||||||| ||||||| | ||||||||||||| | || | | || ||
Sbjct 36199876 GAGTAAGTAAAGAAACGATGAAAGTAGTGGTATTTCCCCGTCGGTGGATATTAGCCGTCT 36199817
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
|||||| || ||||| |||||| ||| | ||| | | ||||||||||||||||||||
Sbjct 36199816 CCCACTAATGCTACAACTCTCATGTCTYCTTACAKTGCCAGACTAGAGTCAAGCTCAACA 36199757
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
|| |||| |||||||||| ||| |||| | |||| ||||||| ||||||||||||||
Sbjct 36199756 GG-TCTTATTTCCCCGCTAATTTTCCCAATCTCGTTTCCTTGGCAGTGGTTTCGCTAGAA 36199698
Query 359 AGTAGATAGGGACA 372
||||||||||||||
Sbjct 36199697 AGTAGATAGGGACA 36199684
>seq902
Length=124958
Score = 154 bits (170), Expect = 5e-35
Identities = 151/194 (78%), Gaps = 7/194 (4%)
Strand=Plus/Minus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCA-CTTGCGCCGAAA------CGGC 237
|| |||||||| ||||||| | ||||||||||||| | | | | | || |
Sbjct 28201 GAGTAAGTAAAGAAACGATGAAAATAGTGGTATTTCATCGTCGGTGGGTATTAGCTCGTC 28142
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||| ||| |||||||||||| ||| | | | | | ||||||||||||| |||||
Sbjct 28141 TCCCAATTAGGCTACACCTCTCATGTCTCCTAATAGTGCCAGACTAGAGTCAAGATCAAC 28082
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||| ||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||
Sbjct 28081 AGGATCTTCTTTCCCCGCTAATTTTCCCAAGCCCGTTTCCTTGGCAGTGGTTTCGCTAGA 28022
Query 358 TAGTAGATAGGGAC 371
|||||||||||||
Sbjct 28021 AAGTAGATAGGGAC 28008
>seq5
Length=36881487
Score = 149 bits (164), Expect = 2e-33
Identities = 150/196 (77%), Gaps = 7/196 (4%)
Strand=Plus/Plus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA-------CGGC 237
|| |||||||| ||||||| | |||||||||||||| || | | | |
Sbjct 23226782 GAGTAAGTAAATAAACGATKAAATTAGTGGTATTTCACCGTCGGTGGATATTTAGCCATC 23226841
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||| || ||||| |||| | || | ||| | | |||||||||||| ||||||
Sbjct 23226842 TCCCACTAATACTACAACTCTTATGTAGCCTTACAGTGCCAGACTAGAGTCAATCTCAAC 23226901
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||
Sbjct 23226902 AGGGTCTTCTTTCCCCGCTAATTTTCCCAAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGA 23226961
Query 358 TAGTAGATAGGGACAG 373
|||| | ||||| ||
Sbjct 23226962 AAGTATAAAGGGAAAG 23226977
Score = 131 bits (144), Expect = 5e-28
Identities = 91/101 (90%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497
||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 36353057 AGAGAGTTATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTGACA 36352998
Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACT 538
||||||||||||||| ||||||| | ||||| ||||||
Sbjct 36352997 TTCAGAGCACTGGGCTTAAATCAC--TATGTCAA-ATCACT 36352960
>seq8
Length=79225393
Score = 143 bits (158), Expect = 9e-32
Identities = 149/192 (78%), Gaps = 9/192 (5%)
Strand=Plus/Plus
Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCGCCGA 231
||||||| | || ||||||| ||||||| | ||||||||||||||| ||| || |
Sbjct 68177824 TCCGCTTAACCGAGCAAGTAAAGAAACGATGAAAGTAGTGGTATTTCACCATTG-GCGGG 68177882
Query 232 AA-----CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAG 286
| | ||||||||||| |||||||||||| ||| | ||| | | ||||||||
Sbjct 68177883 TATTAGCCATCTCCCACTTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACTAGAG 68177942
Query 287 TCAAGCTCAACAGGGTCTTCTT-TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345
||||||||||||||||||| || ||||||| ||| |||||||| || ||||||| ||
Sbjct 68177943 TCAAGCTCAACAGGGTCTTTTTCACCCCGCTAATTTTCCCAAGCCCATTTCCTTGGCAGT 68178002
Query 346 GGTTTCGCTAGA 357
|| |||||||||
Sbjct 68178003 GGCTTCGCTAGA 68178014
Score = 75.2 bits (82), Expect = 4e-11
Identities = 47/51 (92%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||| ||||||||||||| |||||| |||||| ||||||||||||||
Sbjct 33826468 TTCTTCACATTGACATTCAGAGTACTGGGAAGAAATTACATTGCGTCAACA 33826518
>seq376
Length=228695
Score = 138 bits (152), Expect = 4e-30
Identities = 112/136 (82%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|| ||||| || ||||| |||||| ||| | ||| | ||||||| ||||||||||||
Sbjct 17809 CTGCCACTAATGCTACAACTCTCATGTCTCCTTACACTGCCGGACTAAAGTCAAGCTCAA 17750
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||| ||| ||||||||||| ||||| | ||| |||||||||
Sbjct 17749 CAGGGTCTTCTTTCCCCGCTAATTTTCCCAAGCCCGTTTCCTTGCCAGTGTTTTCGCTAG 17690
Query 357 ATAGTAGATAGGGACA 372
| ||| ||||||| ||
Sbjct 17689 AAAGTGGATAGGGGCA 17674
>seq3841
Length=27391
Score = 136 bits (150), Expect = 1e-29
Identities = 144/189 (76%), Gaps = 7/189 (4%)
Strand=Plus/Plus
Query 190 AGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCG------AAACGGCTCCCAC 243
|||||| ||||||| | ||||||||||||||| || | | || ||||||
Sbjct 2287 AGTAAAGAAACGATGAAAGTAGTGGTATTTCACCGTCGGTGGGTATTATCCGTCTCCCAA 2346
Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
| || ||||||||||| ||| | ||| | | |||||||||||||||||||| | ||
Sbjct 2347 T-ATGCTACACCTCTCGTGTCTCCTTACAGTGCCAGACTAGAGTCAAGCTCAACAAGATC 2405
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
||||||||| ||| ||| |||||| |||||||||||| | ||||| |||||| |||||
Sbjct 2406 TTCTTTCCCAGCTAATTTTCCCAAGCACGTTCCCTTGGCAGAGGTTTTGCTAGAAAGTAG 2465
Query 364 ATAGGGACA 372
|||||||
Sbjct 2466 GCAGGGACA 2474
>seq801
Length=138138
Score = 134 bits (148), Expect = 5e-29
Identities = 115/141 (82%), Gaps = 1/141 (1%)
Strand=Plus/Plus
Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
|| |||| |||||| |||||||||||| ||| | ||| | | ||||| || ||||||
Sbjct 43487 CGTCTCCTACTTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACTATAGGCAAGCT 43546
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
|||||| |||||||| ||||||| ||| ||||| ||||||||||||| ||||||||||
Sbjct 43547 CAACAGAGTCTTCTTGCCCCGCTAATTTTCCCAAGACCGTTCCCTTGGCAGTGGTTTCGC 43606
Query 354 TAG-ATAGTAGATAGGGACAG 373
||| | ||| ||||| |||||
Sbjct 43607 TAGAAAAGTGGATAGCGACAG 43627
>seq2147
Length=59640
Score = 125 bits (138), Expect = 2e-26
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC------GGCT 238
|| |||||||| ||||||| | ||||||||||||| | || ||| | ||
Sbjct 43035 GAATAAGTAAAGAAACGATGAAAGTAGTGGTATTTCCCCGTCGGTGAATATTAGCTGTCT 43094
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
|||||| | ||||| |||||| ||| | ||| | | ||||||| |||||||||||
Sbjct 43095 CCCACTAAAGCTACAACTCTCATGTCTCCTTACAGTGCCAGACTAGARCCAAGCTCAACA 43154
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
| || |||||||| | | ||| ||||||||||||| || || ||| |||| |||||
Sbjct 43155 GCGTATTCTTTCCTAGATCATTTTTCCAAGCCCGTTCCTTTAGCAGTGTTTTCACTAGAA 43214
Query 359 AGTAGATAGGGACAG 373
||| |||||||||||
Sbjct 43215 AGTGGATAGGGACAG 43229
>seq7
Length=109384913
Score = 120 bits (132), Expect = 1e-24
Identities = 151/207 (73%), Gaps = 21/207 (10%)
Strand=Plus/Minus
Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCGCCGA 231
||||| || || |||||||| ||||||| | ||||||||||||||| ||| || |
Sbjct 5379219 TCCGCCCAATCGAGTAAGTAAAGAAACGATTAAAGTAGTGGTATTTCACCGTTG-GCGGG 5379161
Query 232 AA-----CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAG 286
| || ||||||||||| ||||||||||| || | ||| ||| ||||||||
Sbjct 5379160 TATTAGCCGTCTCCCACTTATGYTACACCTCTCATGTTTCCTTACAGTGTCAGACTAGAG 5379101
Query 287 TCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTG 346
||||||| |||||||||||| ||| |||||||||| ||||| | |||
Sbjct 5379100 TCAAGCT-----------TCTTTCCCCGCTAATTTTCTCAAGCCCGTTTCCTTGACAGTG 5379052
Query 347 GTTTCGCTAGATAGTAGATAGGGACAG 373
|||| | |||| ||||||| ||||||
Sbjct 5379051 GTTTTGGTAGAAAGTAGAT--GGACAG 5379027
>seq2608
Length=48773
Score = 114 bits (126), Expect = 4e-23
Identities = 69/73 (95%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 34116 GTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGGGG 34175
Query 420 AGGCATTTGGCTA 432
||||||||| |||
Sbjct 34176 AGGCATTTGACTA 34188
Score = 102 bits (112), Expect = 3e-19
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||||||| || |||||| ||||||||||||||| | | ||||||||||| |
Sbjct 32569 TAGTAGATAGGGACARAGGTAATCTCATTAATCCATTCATGCACTTTACTAATTAGATTA 32628
Query 418 CGAGGCATTTGGCTA 432
|||||||||||||||
Sbjct 32629 CGAGGCATTTGGCTA 32643
>seq1402
Length=86603
Score = 114 bits (126), Expect = 4e-23
Identities = 77/87 (89%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 287 TCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTG 346
|||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||| |||
Sbjct 83408 TCAAGCTCAACAGGATCTTCTTTCCCCGCTAATTTTCCCAAGCCCGTTTCCTTGGCAGTG 83467
Query 347 GTTTCGCTAGATAGTAGATAGGGACAG 373
|||| |||||| |||||| ||||||||
Sbjct 83468 GTTTYGCTAGAAAGTAGAGAGGGACAG 83494
>seq100
Length=503774
Score = 114 bits (126), Expect = 4e-23
Identities = 86/100 (86%), Gaps = 2/100 (2%)
Strand=Plus/Plus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
|| |||||||||||||||||| | || ||||| | || ||| |||||| |||||| ||
Sbjct 365280 CTGAAGAGAGTCATAGTTACTACTGCTGTTTATCTGCTTTTGCTTGAATCTCTTCATGTT 365339
Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||| ||||||||||||||||||||||||||||||||
Sbjct 365340 GACATT--GAGCACTGGGCAGAAATCACATTGCGTCAACA 365377
>seq4
Length=10813142
Score = 95.1 bits (104), Expect = 4e-17
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| || ||| ||||| | || |||| | ||||||||||||||||||
Sbjct 5222192 CTTTTGCTCCACGCGAGGTTTCTTTCCTTGCTGAGCTAGCATTAGGACACCTGCGTTATT 5222133
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATC 116
||| |||||||| ||||||||| ||||||||||||||| || ||| ||
Sbjct 5222132 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCACCTGGAAACGTCCTC 5222083
>seq202
Length=341780
Score = 86.0 bits (94), Expect = 2e-14
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419
||| |||||||||||| |||| ||| || |||||||||| ||| |||||||||||||
Sbjct 14035 GTAAATAGGGACAGTGAAAATCCTGTTGATTAATTCATGCGCATCAATAATTAGATGACG 14094
Query 420 AGGCATTTGGCT 431
||||||||||||
Sbjct 14095 AGGCATTTGGCT 14106
>seq6
Length=23341858
Score = 84.2 bits (92), Expect = 7e-14
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423
|||||||||||||||||||||||||| || | |||| ||||||||||||||| ||||
Sbjct 13075457 ATAGGGACAGTGGGAATCTCGTTAATTCAGTAATGCATGTCACTAATTAGATGGTGAGGT 13075516
Query 424 ATTTGGCTA 432
||||||||
Sbjct 13075517 GTTTGGCTA 13075525
>seq10
Length=51758932
Score = 80.6 bits (88), Expect = 9e-13
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||| ||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||
Sbjct 9564804 CAGGATCTTCTTTCCCCGCTAATTTTCCCAAGCCCGTTCCCTTGGCAGTGGTATCGCTAG 9564745
Query 357 ATAGTAGAT 365
| | ||||
Sbjct 9564744 AAAAAAGAT 9564736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634991740928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |