Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13]
12,736 sequences; 1,042,628,579 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq4487 295 2e-77
>seq4487
Length=19373
Score = 295 bits (326), Expect = 2e-77
Identities = 401/560 (72%), Gaps = 21/560 (4%)
Strand=Plus/Plus
Query 5 CTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACC 64
||||| || |||||||||| || ||| ||| || ||| | | |||||| || |||
Sbjct 12872 CTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGTACTATCAAGCTGATTTCCGACC 12931
Query 65 AGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAA 124
|| || ||||| | |||||||||||| |||| ||||| | ||||||||||| ||
Sbjct 12932 AGCTCTAGCTTACCTTCGCACGCCTCCGTTACTTTTTAGGAGG-CGACCGCCCCAGTCAA 12990
Query 125 ACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACG 184
||||||||||| || ||||| |||||| ||| | |||||||||| | ||
Sbjct 12991 ACTACCCACCATACAATGTCCTAGTTCCAGATAATGAAACGTAGTTAGATATCAAAAGCG 13050
Query 185 GTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCC 244
|| ||||||| |||| ||||||| | |||||| | ||| |||||||
Sbjct 13051 TAAAGGGTGGTATCTCAAGGTTGACTCCATTATAGCTAGCGCCATAACTTCAAAGTCTCC 13110
Query 245 CACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGG 303
|||||||||| |||| | | ||| |||| |||||||||| ||||| | ||||
Sbjct 13111 CACCTATCCTGCACATCACACTTTTAATAGCAATGTAAAGCTATAGTAAAGGTGCACGGG 13170
Query 304 GTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCC 363
|||| |||||| ||||| | | | |||||| || | | | ||||||| | |
Sbjct 13171 GTCTCTTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGT 13230
Query 364 TGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACA 423
|| | ||||||| | | | |||||||||||||||||| |||||||||||||||||||
Sbjct 13231 GATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACA 13290
Query 424 AGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483
||||||||||||||||||||| || | ||||| ||||||||||||||||||||||||
Sbjct 13291 AGGAATTTCGCTACCTTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATT 13350
Query 484 ACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCA 543
|| | | | ||| |||| |||||||||||||||||||||
Sbjct 13351 ----------CAGAGCTTG---------CACCCCTCCTATTAACCTTCCAGCACCGGGCA 13391
Query 544 GGCGTCAGTCCGTATACCTC 563
|||||||| || ||||| ||
Sbjct 13392 GGCGTCAGACCCTATACTTC 13411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702183182336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |