Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq7322 609 7e-172 seq3237 428 1e-117 seq12 412 1e-112 seq4 354 2e-95 seq532 333 8e-89 seq9 163 9e-38 seq1 138 3e-30 seq7 125 2e-26 >seq7322 Length=3513 Score = 609 bits (674), Expect = 7e-172 Identities = 448/513 (87%), Gaps = 13/513 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| || | |||||| |||| |||||||||||||||||| Sbjct 2206 GTACTCATTCCAATTACCAGACTCATA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 2148 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2147 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2088 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||| Sbjct 2087 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 2028 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 2027 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 1968 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293 | |||||| |||||| ||| |||||| |||||||| || |||| | | || | Sbjct 1967 CTAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 1910 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352 ||| | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||| Sbjct 1909 CGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 1850 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||||| |||||||||| |||| |||||| |||||| |||| |||||||| Sbjct 1849 AGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGGTACCATCAAACAAACTATAACTGA 1791 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471 ||||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||| Sbjct 1790 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCT 1731 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 1730 TAATCTTTGAGACAAGCATATGACTACTGGCAG 1698 >seq3237 Length=36711 Score = 428 bits (474), Expect = 1e-117 Identities = 418/529 (79%), Gaps = 29/529 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || | | || ||| || ||||| ||||| | ||||||||| Sbjct 13115 GTACTCATTCCGATTACGGAGCCTCGAATGAGTCCCGTATCGTTATTTTTCGTCACTACC 13056 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 13055 TCCCCGTGCCGGCAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 12996 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 12995 TTCTCAAGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 12936 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 | || | ||| |||| || |||||||| |||||| ||||||| || ||||||| Sbjct 12935 AAGCGCAGAACCTTCCATTGACAGTTGATAAGGCAGACATTTGAAAGACGYGTCGCCGGT 12876 Query 240 TC-AAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGG-----AGCCC---CG 288 | || || || |||| | | |||||||| || ||||||||| | || || Sbjct 12875 ACGGAGACCGTGTGATTGGCTCAAAGTTATTCAGAGTCACCAAGGCAAACGGACCGGGCG 12816 Query 289 A--AGGGCGTTGGTTTTTTATCTAATAAATACACCCCT------TCCGAAGTCGGG--GT 338 | || || | | |||| |||||||||| | |||| |||| |||||| Sbjct 12815 AGCCGGCCGATTGGTTTTGATCTAATAAAAGCGTCCCTCCCATCTCCG--GTCGGGACTC 12758 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATC 395 | || |||||||||||||||||||||||||| |||||||| ||| || ||||| || Sbjct 12757 TGTTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGT-GGGTACGGTC 12699 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 || ||| ||||||||||||||||||||||||| ||||||| || | | |||| || Sbjct 12698 TAAGGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA-ATTTGGCTTGCAC 12640 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12639 TGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 12591 >seq12 Length=46368093 Score = 412 bits (456), Expect = 1e-112 Identities = 416/532 (78%), Gaps = 33/532 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || | | | ||| || |||||| ||||| | ||||||||| Sbjct 24067131 GTACTCATTCCRATTACGGGAACTCGGATGAGTCCCGTATCATTATTTTTCGTCACTACC 24067072 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 24067071 TCCCCGTGCYGGGAGTGGGTAATTTGCGCGCCTGCTACCTTCCTTGGATATGGTAGCCGT 24067012 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| ||||||||||||||||||| ||||||||||||||||||| |||| |||||||| Sbjct 24067011 TTCTTAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACTCGTTACAACCATGGT 24066952 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||| ||||| |||||||| |||||| |||| || || | ||||||| Sbjct 24066951 AGGCGCAGAACCTACAATCGACAGTTGATAAGGCAGACATTTTAAAGACGCGTCGCCGGT 24066892 Query 240 TC-AAGGCCATGCGATTCGTT--AAGTTATT--ATGAATCACCAAGGAGCCCCGA-AGGG 293 | || ||||||||| | | |||||||| || ||||||||| | || ||| Sbjct 24066891 ACGGAGACCATGCGATCGGCTCAAAGTTATTGAGAGAGTCACCAAGGCAAACGGACCGGG 24066832 Query 294 CG----------TTGGTTTTTTATCTAATAAATACACCCCT------TCCGAAGTCGGG- 336 || |||| |||| |||||||||| | || | |||| ||| || Sbjct 24066831 CGAGCCGGCCAATTGG-TTTTGATCTAATAAAAGCGTCCTTCCTGTCTCCG--GTCTGGA 24066775 Query 337 -GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACT 392 | || |||||||||||||||||||||||||| |||||||| ||| || ||||| Sbjct 24066774 CTCTGTTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGT-GGGTACG 24066716 Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 || || ||| ||||||||||||||||||||||||| ||||||| || | | |||| Sbjct 24066715 GTCTAAGGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA-ATTTGGCTTG 24066657 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 24066656 CACTAAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTAATGGCAG 24066605 >seq4 Length=10813142 Score = 354 bits (392), Expect = 2e-95 Identities = 401/529 (76%), Gaps = 30/529 (6%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| | || | | ||| || ||||| ||| | |||||||||| Sbjct 5228510 TACTCATTCCAATTACGGGGCCTCGGATGAGTCCCGTATCGTTATATTGCGTCACTACCT 5228569 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||| | |||||| |||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 5228570 CCCCATCTCGGGAGTGGGTAATTTGCGCACCTGCTGCCTTCCTTGGATGTGGAAGCCGTT 5228629 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||| ||||||| || |||||||| ||| ||||||| ||||||||| ||||||||| Sbjct 5228630 TCTCAGACTCCCTCGCCTGAATCGAAACCTGATTCCCCATTACCCGTTACAACCATGGTA 5228689 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| | ||||||||| ||| |||||| |||||| ||||||| || | ||||||| Sbjct 5228690 GGCGCAGAACCTACCATCAAAATTTGATAAGGCAGACATTTGAAAGACGCGTCGCCGGTA 5228749 Query 241 C-AAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAGCCCCGA-AGGGCG- 295 | || || |||||| | | || ||||| || ||||||||| || ||||| Sbjct 5228750 CGGAGTCCGTGCGATCGGCTCAAATTTATTCAGAGTCACCAAGGCAAATGGACTGGGCGA 5228809 Query 296 ---------TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG--------GGT 338 |||| |||| |||||| ||| || | || ||| ||| | Sbjct 5228810 GCCGGCTGATTGG-TTTTGATCTAAGAAAAGCATCTCTCCCGTCTCCGGTACGAGACTAT 5228868 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATC 395 |||| ||||||||| |||||||||||| || |||||||| ||| || ||||| || Sbjct 5228869 GTTTA-CATGTATTATCTCTAGAATTACTACAGTTATCCAAGTAAATGT-GGGTACGGTC 5228926 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 || ||| |||| ||||||||||||| |||||| ||| || || | | |||| || Sbjct 5228927 TAAGGAACCATAAATGATTTAATGAGCTATTCGCGATTTAACCTTA-ATTTGGCTTGCAC 5228985 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 5228986 TTAGACATGCATGACTTAATCTTTGAGACAAGCATATGACTACTGGCAG 5229034 >seq532 Length=192510 Score = 333 bits (368), Expect = 8e-89 Identities = 372/490 (76%), Gaps = 26/490 (5%) Strand=Plus/Minus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 |||| || || | ||||||| ||||||||| ||||| |||||||||||||||||||||| Sbjct 98468 TATCGTTAATTTTCGTCACTATCTCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTG 98409 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 |||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| | Sbjct 98408 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCTTTCTCCGGAATCGAAACCTGATTTC 98349 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 ||||||||||| |||| |||||| | ||||||| || |||||||| |||||| Sbjct 98348 TCGTTACCCGTTACCGCCATCGTAGGCACAGAAGCTACCATAGACAGTTGATAAGGCAGA 98289 Query 217 AATTTGAATGAACCATCGCCGGCTCAAGG-CCATGCGATTC-GTT--AAGTTATTATGAA 272 |||||||||| | ||||||| | || ||||| |||| | | ||||||| | | Sbjct 98288 CATTTGAATGACGCGTCGCCGGTACGGGGACCATG-TATTCAGCTCAAAGTTAT--TCAG 98232 Query 273 TCACCAAGG----------AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAA----TAC 318 ||||||||| || | | | || | | |||| |||||||||| ||| Sbjct 98231 TCACCAAGGCAAACGGACCAGGCGAGCCKGCCGATTGGTTTTGATCTAATAAAAGCGTAC 98172 Query 319 ACCCCTTCCGAAGTCGGG--GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATC 376 ||| || |||| || | || |||||| ||||||||||||||||||| | ||| Sbjct 98171 CTCCCGTCTCCAGTCAGGACTCTGTTTGCATGTTTTAGCTCTAGAATTACCACAGCTATT 98112 Query 377 CATGT--AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTT 434 || || | | ||||| || || ||| |||||||||||||| | || |||| |||| Sbjct 98111 CAAGTAAATGAKGGTACGGTCTAAGGAACCATAACTGATTTAATTAACCTTTCGTGGTTT 98052 Query 435 CACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGA 494 ||| || | | |||| || |||||| ||||||||||||||||| |||||||||||| Sbjct 98051 CACCTTA-ATTTGGCTTGCACCGAGACATACATGGCTTAATCTTTGATACAAGCATATGA 97993 Query 495 CTACTGGCAG 504 |||||||||| Sbjct 97992 CTACTGGCAG 97983 >seq9 Length=22721933 Score = 163 bits (180), Expect = 9e-38 Identities = 119/138 (86%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 75 TGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTC 134 || |||||| |||||||||||| || ||||||||||| ||| |||||||||||||||||| Sbjct 9555302 TGCGTAATTAGCGCGCCTGCTGTCTGCCTTGGATGTGATAGTCGTTTCTCAGGCTCCCTC 9555243 Query 135 TCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTAC 194 |||||||||||||||| ||||||||||||| ||| |||||||||||| | ||||| Sbjct 9555242 TCCGGAATCGAACCCTGATTCCCCGTTACCTGTTACAACCATGGTAGGCGCAGAACCTAC 9555183 Query 195 CATCGAAAGTTGATAGGG 212 ||| || |||||||| || Sbjct 9555182 CATTGACAGTTGATAAGG 9555165 >seq1 Length=40175940 Score = 138 bits (152), Expect = 3e-30 Identities = 153/204 (75%), Gaps = 20/204 (10%) Strand=Plus/Minus Query 37 TATCAGTATTTATTGTCACTACCTCCCCG-TGTCGGGATTGGGTAATTTGC--------- 86 |||| ||||| | ||||||||||||| | || | ||| |||||||||||| Sbjct 25750472 TATCGTTATTTTTCGTCACTACCTCCCGGGTGCCAGGAGTGGGTAATTTGCCTGCCTGCC 25750413 Query 87 -GC--GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATC 143 || |||||| ||||||||||||| |||||||| ||||||| || |||||||||||||| Sbjct 25750412 TGCCTGCCTGCCGCCTTCCTTGGATATGGTAGCCATTTCTCAAGCCCCCTCTCCGGAATC 25750353 Query 144 GAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAG 203 || |||| ||||| |||||| |||||| ||||| | |||| |||| | | Sbjct 25750352 GAGCCCTGATTCCTAGTTACC-------ACCATGATAGGCGCAGAACCTAGCATCAAGGG 25750300 Query 204 TTGATAGGGCAGAAATTTGAATGA 227 |||||| ||||| ||||||| || Sbjct 25750299 TTGATAAGGCAGTCATTTGAAAGA 25750276 >seq7 Length=109384913 Score = 125 bits (138), Expect = 2e-26 Identities = 91/104 (88%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| ||||||||||||||||||||||||| ||||||| || | | | || ||| ||| Sbjct 62143697 AACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA-ATTTGGTTTGCACTGAGA 62143755 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 62143756 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTAGCAG 62143799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510207635456