Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 196 4e-45 seq7 114 1e-20 >seq4 Length=10813142 Score = 196 bits (216), Expect = 4e-45 Identities = 725/1118 (65%), Gaps = 39/1118 (3%) Strand=Plus/Minus Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143 || || || || | || ||| || | ||| |||| ||||| ||||| || || || ||| Sbjct 9996653 GTAAATTGAATGGGATCAGCTGCTGGCTTTGTCCGCAGATAATACATCCCCGTTTTTAGG 9996594 Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCCACA 65203 || |||| | ||||||||||| |||| | || || |||| ||||| || | Sbjct 9996593 CCCAATTTCCAACCGTAGAAATGCATAGATGTGAGCTTACCAAAATTTGGCTCAGCAATG 9996534 Query 65204 TGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATG 65263 || || || | ||||| || ||||| ||| | |||||||||||| ||||| | | Sbjct 9996533 TGGATGTTGAGTGACTGGCTTTGATCAATGAATGCACCACGATCTGCGGCCATCTGGAGT 9996474 Query 65264 ATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAG-GCG---ACGTACCTCAATTG 65318 || || | || || |||||||| |||||||| ||||| || | || |||| | Sbjct 9996473 AT-CGCCTTCTGAGAAATCTCCCAAACGGTCTTATACAGAGCCTTTATGT-CCTCCG--G 9996418 Query 65319 GAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATCGAC 65377 || ||| || |||| |||| || || | | || || || | || | || Sbjct 9996417 GATTCTG-TCTATGTTTTGGATGGACCCTTTGTTTTTCAGTATTGTGTTTTTCATTTCAC 9996359 Query 65378 TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAAC 65437 | | ||||||||| | ||| | |||| | || |||| | || | |||||||||| Sbjct 9996358 TGTC-CCACAAACCAAGCTCGGTGAGATCCCTTAGCAGGTGATGGTTCACGACTTGGAAC 9996300 Query 65438 TCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTG 65497 || || || ||||| | || ||||| || | ||| || |||||||||||| || Sbjct 9996299 TCTCCTGATAGTACCCTTCGAGTGTAGATATTCGTGGTGTATGGCTCAAAGGATTCATTG 9996240 Query 65498 TTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGC 65557 || || || || || |||||||| || || ||||| || || | | | ||||||| | Sbjct 9996239 TTTCCGAGTATCTGTGCAGTAGAAGCTGTAGGCATAGGTGCAAGAAGAAGAGAGTTTCTC 9996180 Query 65558 AATCC--GTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGT 65615 | || || || |||| || || | | |||| | ||||| | || | Sbjct 9996179 ACACCATGTGCAG--CAATTTTTTGTTTTAGAGCCGCCCAATCCCACAAAGMAGTA--GG 9996124 Query 65616 CGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGA 65675 | || ||| |||||| || | || || | || |||| | || | || Sbjct 9996123 AGTCA--CACC--CCACATGTCGTACTGAAGAATACCCTTACTAACTGGACATCCTTCAT 9996068 Query 65676 AACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAAT 65735 | | ||||| ||| | || ||||| | ||| || | ||| | ||| | | | Sbjct 9996067 ACGTCTCGTATGGCCCCAGTTTCTCTGCAAGCTCACAACTAGCCTCCAATGCCCCGTAGT 9996008 Query 65736 AAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATAC 65795 ||||||| || ||||| | ||| | || |||| | || || ||| | || | | Sbjct 9996007 AAATGGTTTCAAAAATTTGAGCATTCAATTTGCGTGAACCCTCACTGTCGAAAGGAAGCC 9995948 Query 65796 CCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCA 65855 ||| |||| || | |||||||||||||| | ||| || || ||||| || || | || Sbjct 9995947 GCATTAGGATGAAGGCATCGGCCAGACCTTGGATTCCGATGCCAATGGGTCGGTGCCTCA 9995888 Query 65856 AATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAAT 65915 ||||| || | || |||| || || ||||||||| ||| || || |||| || Sbjct 9995887 TGTTGGAGAGTTTGGCTTCAGCAACTGGATAGTAATTGGCATCTATGATCTTGTTCAGAT 9995828 Query 65916 TGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGAT 65975 | | ||||| | | ||||||| | | | | || |||||| | || Sbjct 9995827 TCCTCGTCACTAGTTTG--GATACGTT-CTTTAGCTTGA---CAAAATCGTAAG------ 9995780 Query 65976 CGGGAGT-GCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCT 66034 ||| | | | |||||| || | ||||| || || | ||| || ||||| Sbjct 9995779 ----AGTTGTCCAAATTAACAAACATGTTGACGGCAATCGAGGCCAAGTTACACACAGCA 9995724 Query 66035 ATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTG 66094 ||||| ||||| | | |||| || ||||| || ||||| ||||| || || || || Sbjct 9995723 ATCTCATCAGGTGAGCTATATTCCACAATCTCTGTGCATAGATTGCTACACTTGATCGTT 9995664 Query 66095 CCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTG 66154 || | |||||| || || ||| | || ||||||||||| || | |||||| || || Sbjct 9995663 CCAAGATTCTGCTGGTTGGACTTCCTGTTACATGCATCCTTATAAAGCATGTAGGGTGTC 9995604 Query 66155 CCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 || || || || |||||||| ||||| ||||||||||| Sbjct 9995603 CCTGTTTCTACCTGGGACTCRATGATAGCGTGCCAAAG 9995566 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 66293 TTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCA 66352 ||||| || ||||| || ||| || | | || ||||| | ||||||||| ||| Sbjct 9986491 TTGTGAGGGCACATGAGACTCCAGTCCTCGTTCTTCTCTACTCTCTCCATAAATAGGTCA 9986432 Query 66353 GGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTT 66411 || ||||| ||||| || || ||||| | || || ||||| |||| ||| ||||| Sbjct 9986431 GGAATCCACAGGGCATAAAACAGATCTCTGGCGCGGACTTCCTCCTTGCCTGTGTTTTTT 9986372 Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 || ||| ||||||||||| | || ||||||||||| |||||||| || || || Sbjct 9986371 TT-CAGGTCCAGGAACTCAAACACATCAGCATGCCATGGCTCCAGGTAAATTGCAAA 9986316 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 67061 GTCTGCTTGTGCATGTTGGAGATGGCGATACGGGCGGCCAGGACACCATAATCGGGATGT 67120 |||| |||||| | ||| || | ||||| | || || |||||| ||||||| || ||| Sbjct 9975096 GTCTCCTTGTGTAGGTTTGACACAGCGATTCTAGCAGCAAGGACAGCATAATCTGGGTGT 9975037 Query 67121 AGAGTCATCATACTGGCGGCAGTTTCAGCGGCCAAGGTATCAAGTTCAGCGGTAGTCACA 67180 || |||| |||||||||||||||| |||| | | || | || |||| || ||| Sbjct 9975036 TTGGTTGTCATTGTGGCGGCAGTTTCAGCAGCCAGGTTGTCCAACTCGACGGTTGTGACA 9974977 Query 67181 CCAGGATACAGGCCA 67195 |||| ||| || ||| Sbjct 9974976 CCAGAATATAGTCCA 9974962 >seq7 Length=109384913 Score = 114 bits (126), Expect = 1e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 |||||||| || || || || || |||||| ||| || ||||||||||| | ||| Sbjct 105115224 TTCAATGCAATTGAAACCATGCCATGTGTGAAGAAGAAGGCAGATTGGGCCTTAGAATGG 105115165 Query 61459 ATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGT 61518 |||| | || || ||||| || ||||| | | |||||||| | || ||||| Sbjct 105115164 ATCAGCTCCGAGACTGCCACATTCGGAGAACGGATAATTGCATTTGCAGCTGTTGAGGGC 105115105 Query 61519 GTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCC 61578 | ||||| ||| ||||| ||||| ||||||||||| || || || |||||||| Sbjct 105115104 ATCTTTTTTTCTGGTAGCTTTGCTGCAATTTTTTGGTTGAAAAAGCGAGGTCTTATGCCA 105115045 Query 61579 GGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 || || || ||||||||||| | || || || || |||| || Sbjct 105115044 GGCCTCACATTCAGCAATGAACTCATCTCCCGAGATGAGGTCA 105115002 Score = 102 bits (112), Expect = 6e-17 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 61193 ATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATT 61252 ||||||| |||||||| | || |||||||| || || || || || || ||||| || Sbjct 105116876 ATTTCATCAAACATGTCCTAGCATTCTTTGCYGCATCTGATGGCATTGTTAATGAAAACC 105116817 Query 61253 TATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCC 61312 | ||||| | ||| || || ||||||||| | || ||| | || || || || || | Sbjct 105116816 TTGTGGAAAGATTCAGTCAAGAAGTGCAAGTGACCGAAGCGAGGTGCTTTTATGGTTTTC 105116757 Query 61313 AGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTA 61367 | || ||||| ||||| | || || || ||||| ||| | ||||| ||||| || Sbjct 105116756 AAATAGCCATCGAGAACATTCATTCAGAAATGTATAGTCTCCTCATTGATACATA 105116702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397506289495040