Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq6049 125 2e-24 >seq6049 Length=7563 Score = 125 bits (138), Expect = 2e-24 Identities = 261/385 (68%), Gaps = 8/385 (2%) Strand=Plus/Minus Query 2518 AAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAA 2577 ||||| ||||| || |||| ||||||| ||| | ||| |||||| || ||||||||| Sbjct 2930 AAATATCCAATAATTTCTATAGAAGATGCAATGAATGAAGACGACTATGAAGGTTGGAAA 2871 Query 2578 TCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACT 2637 | ||||||| | | || ||||| ||||||| || || || || || || || || Sbjct 2870 TTACTTACTGCAAAATTGGGAAGTAAAATTCAATTAGTCGGGGATGATTTATTTGTTACA 2811 Query 2638 AACACTGCTTACCTTGAA--AAAGGTATTGC--AGAACACGCTGCTAACTCAATCCTTAT 2693 || || || || ||||| || | |||| | | || || | | || || Sbjct 2810 AATTGTGA--ACTAATAAGTAAAGGAATAGAGGAGAAAATG--GCAAATGCTGTACTAAT 2755 Query 2694 CAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGA 2753 ||| ||||| || || || | || |||||||||| || || |||||||| ||| Sbjct 2754 CAAGCCAAACCAGATAGGAACACTTACGGAAACTTTTGCTGCCATTGAAATGGCAAAATT 2695 Query 2754 AGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGC 2813 | ||| |||| || | | || ||||| ||||||||||| |||||| |||| || | Sbjct 2694 AAATGGCTACAGGGCTATTATTTCTCACCGCTCAGGTGAAACAGAAGATACAACGATATC 2635 Query 2814 TGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGA 2873 | || ||||||| | || ||| ||||| ||||| || || |||| ||| |||| Sbjct 2634 CCACATATCAGTTGCGTCGAATTGTGGGCAAATAAAGACTGGCTCGCTGTCGCGTTCTGA 2575 Query 2874 CCGTATTGCTAAATACAACCAATTG 2898 | |||| || || || ||||| Sbjct 2574 TAGGCTTGCAAAGTATAATGAATTG 2550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156014800752384