Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq47091 84.2 3e-14 seq17079 77.0 5e-12 seq63670 73.4 6e-11 >seq47091 Length=2776 Score = 84.2 bits (92), Expect = 3e-14 Identities = 67/78 (86%), Gaps = 2/78 (3%) Strand=Plus/Minus Query 149 TCGTTGAATACAT-CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 207 ||||| |||| | || |||||||||||||| ||||| |||||||||||||||||||| Sbjct 1578 TCGTTTGATACCTTCATTGTAGCGCGCGTGCAGCCCATGACATCTAAGGGCATCACAGAT 1519 Query 208 CTGTTATTGCCTCAAACT 225 ||||||||| ||||| || Sbjct 1518 CTGTTATTG-CTCAATCT 1502 >seq17079 Length=4736 Score = 77.0 bits (84), Expect = 5e-12 Identities = 52/57 (91%), Gaps = 1/57 (2%) Strand=Plus/Plus Query 169 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||| |||||| |||||||| ||||||||||||||||||||| ||||| || Sbjct 1878 GCGCGCGTGCAGCCCAGGACATCTAAAGGCATCACAGACCTGTTATTG-CTCAATCT 1933 >seq63670 Length=5285 Score = 73.4 bits (80), Expect = 6e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 ||||||| |||| | |||||| | |||||||||||||||||||||||||| |||| Sbjct 2083 TGTAGCGTGCGTACAGCCCAGGAAATCTAAGGGCATCACAGACCTGTTATGGCCT 2029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750638695760