Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01]
186,864 sequences; 541,697,276 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq47091 84.2 3e-14
seq17079 77.0 5e-12
seq63670 73.4 6e-11
>seq47091
Length=2776
Score = 84.2 bits (92), Expect = 3e-14
Identities = 67/78 (86%), Gaps = 2/78 (3%)
Strand=Plus/Minus
Query 149 TCGTTGAATACAT-CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 207
||||| |||| | || |||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1578 TCGTTTGATACCTTCATTGTAGCGCGCGTGCAGCCCATGACATCTAAGGGCATCACAGAT 1519
Query 208 CTGTTATTGCCTCAAACT 225
||||||||| ||||| ||
Sbjct 1518 CTGTTATTG-CTCAATCT 1502
>seq17079
Length=4736
Score = 77.0 bits (84), Expect = 5e-12
Identities = 52/57 (91%), Gaps = 1/57 (2%)
Strand=Plus/Plus
Query 169 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||||||| |||||| |||||||| ||||||||||||||||||||| ||||| ||
Sbjct 1878 GCGCGCGTGCAGCCCAGGACATCTAAAGGCATCACAGACCTGTTATTG-CTCAATCT 1933
>seq63670
Length=5285
Score = 73.4 bits (80), Expect = 6e-11
Identities = 49/55 (89%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219
||||||| |||| | |||||| | |||||||||||||||||||||||||| ||||
Sbjct 2083 TGTAGCGTGCGTACAGCCCAGGAAATCTAAGGGCATCACAGACCTGTTATGGCCT 2029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750638695760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |