Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01]
186,864 sequences; 541,697,276 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq180273 75.2 2e-11
seq9453 75.2 2e-11
>seq180273
Length=2806
Score = 75.2 bits (82), Expect = 2e-11
Identities = 103/139 (74%), Gaps = 10/139 (7%)
Strand=Plus/Plus
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-----TTTGCTCGAATA 121
||| || ||||| |||| |||||||||||| |||||||||| | ||| ||||
Sbjct 692 CAGTACAATTACTATGAACCAATTAGAGTGTTTAAAGCAGGCCCCATTTATGCCTAAATA 751
Query 122 -CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT--GTTGGTTTCTAGGAC 178
| | || |||||||||||| ||||| | |||||||||| ||||||| ||| |
Sbjct 752 TTCTCTGGATAGAATAATAGAATGAGACGT-CTGTTCTATTTTCAATTGGTTTTTAGATC 810
Query 179 -CGCCGTAATGATTAATAG 196
| |||||||||||||||
Sbjct 811 AAGACGTAATGATTAATAG 829
>seq9453
Length=31705
Score = 75.2 bits (82), Expect = 2e-11
Identities = 74/92 (80%), Gaps = 3/92 (3%)
Strand=Plus/Plus
Query 228 AGAGGTGAAATTCTTGGATTTATTG-AAGACTAACTACTGCGAAAGCGTTCACCAAGGAT 286
||||||||||||| ||| | || | ||||||||| | ||||||| || |||| |||
Sbjct 3878 AGAGGTGAAATTCGTGG-TCCATCGTAAGACTAACAAAAGCGAAAGTATTAGCCAAAGAT 3936
Query 287 GTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||| |||||||| ||||||||||| || ||
Sbjct 3937 GTTTTTATTAATCA-TGAACGAAAGTGAGAGG 3967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913489820672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |