Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01]
186,864 sequences; 541,697,276 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq41432 87.8 7e-15
seq16228 86.0 3e-14
>seq41432
Length=8253
Score = 87.8 bits (96), Expect = 7e-15
Identities = 99/133 (74%), Gaps = 5/133 (4%)
Strand=Plus/Plus
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|||||| | || |||||||||||| ||||||||| ||| | | || |||| |||| |
Sbjct 7376 AGCATATATACTGTGACCCGAAAGATTGTGAACTATACCTTATCAAGGCGAAGTCAGACG 7435
Query 616 AAA-----CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670
| | | ||| | |||| ||| ||| ||||| ||||||||||||| |||| | |||
Sbjct 7436 ATATCCCACCCTGATAGAGGATCGTAGCAGTTCTTACGTGCAAATCGATAGTCAGAATTG 7495
Query 671 GGTATAGGGGCGA 683
| |||| || |||
Sbjct 7496 GATATAAGGACGA 7508
>seq16228
Length=14440
Score = 86.0 bits (94), Expect = 3e-14
Identities = 86/108 (80%), Gaps = 3/108 (3%)
Strand=Plus/Plus
Query 76 GGTAAATTTCTTCTAAAGCTAAATATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGA 134
|||||| | | ||||| |||||||| | ||| ||||||||||||| | ||||| ||||
Sbjct 9479 GGTAAACTCCATCTAAGACTAAATAT-GACCACGAGACCGATAGCGAATAAGTACCGTGA 9537
Query 135 TCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182
||||| |||||| ||| || | ||||||||||| || ||||||||
Sbjct 9538 GGGAAAGTTGAAAA-AACTCTGAATAGAGAGTTAAACAGTACGTGAAA 9584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2075991767200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |