Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01]
186,864 sequences; 541,697,276 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq49086 116 6e-24
seq84775 107 3e-21
seq46644 104 4e-20
seq9453 104 4e-20
seq186213 96.9 6e-18
seq65221 96.9 6e-18
seq183355 93.3 7e-17
seq81929 89.7 8e-16
seq108742 87.8 3e-15
seq47091 84.2 3e-14
seq15237 82.4 1e-13
seq165292 80.6 4e-13
seq63670 78.8 1e-12
seq144283 77.0 5e-12
seq58624 77.0 5e-12
seq17079 77.0 5e-12
seq78456 75.2 2e-11
>seq49086
Length=13499
Score = 116 bits (128), Expect = 6e-24
Identities = 85/99 (86%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||||||||||||| |||||||||||||||| |||||||| || ||||||||||||| |
Sbjct 1832 GTCTCGTTCGTTATCAGAATTAACCAGACAAAGCACTCCACAAAATAAGAACGGCCATAC 1891
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
||||| | || || | |||||||| ||||| |||| ||
Sbjct 1892 ACCACTATCCTTAAATTCAAGAAAAAGCTAATAATCAGT 1930
>seq84775
Length=1749
Score = 107 bits (118), Expect = 3e-21
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG- 217
|||| |||||||| ||||||||||| |||||||||||||| |||||| ||||||||||
Sbjct 875 GTCTAATTCGTTATTGGAATTAACCAAACAAATCACTCCACGAACTAAAAACGGCCATGC 816
Query 218 CACCACCACCCATAGAA-TCAAGAAAGAGCTATCAATCTGT 257
|||| ||||||| | || || |||||| ||||| | |||||
Sbjct 815 CACCCCCACCCAAAAAATTCGAGAAAGGGCTATTATTCTGT 775
>seq46644
Length=14789
Score = 104 bits (114), Expect = 4e-20
Identities = 76/87 (87%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225
||||||| ||||||| ||||||||||||||| || ||| |||||||||||| ||||| ||
Sbjct 5775 TCGTTATTGGAATTATCCAGACAAATCACTCTACGAACGAAGAACGGCCAT-CACCATCA 5833
Query 226 CCCATAGAATCAAGAAAGAGCTATCAA 252
|||||||| | |||||||||||| ||
Sbjct 5834 CCCATAGATTTGAGAAAGAGCTATTAA 5860
>seq9453
Length=31705
Score = 104 bits (114), Expect = 4e-20
Identities = 85/103 (83%), Gaps = 3/103 (3%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA---GAACGGCCA 215
||||||||||||||||||||||||||||||||| ||||||| |||||| || | |
Sbjct 4305 GTCTCGTTCGTTATCGGAATTAACCAGACAAATTACTCCACGAACTAATACAAAGGTTTA 4246
Query 216 TGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|| ||| |||||||||| || | |||||||||| ||||| ||
Sbjct 4245 TGGCCCAACACCCATAGATTCGATAAAGAGCTATTAATCTATC 4203
>seq186213
Length=1514
Score = 96.9 bits (106), Expect = 6e-18
Identities = 58/61 (95%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||
Sbjct 1338 GTCTCGTTCGTTATCGGAATTATCCAGACAAATTACTCCACGAACTAAGAACGGCCATGC 1279
Query 219 A 219
|
Sbjct 1278 A 1278
>seq65221
Length=6602
Score = 96.9 bits (106), Expect = 6e-18
Identities = 80/98 (82%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220
|| ||| || | |||||||||||||| |||||| |||| ||||||||| |||||||||
Sbjct 4342 CTTGTTTATTTTTGGAATTAACCAGACCAATCACACCACTAACTAAGAATGGCCATGCAT 4401
Query 221 CACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||| ||||| | ||| |||||| ||||||||
Sbjct 4402 CACCACCGATAGATCTGATAAAAAGCTATTAATCTGTC 4439
>seq183355
Length=2353
Score = 93.3 bits (102), Expect = 7e-17
Identities = 82/100 (82%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||||||||| ||||| ||| |||||| |||||| ||| ||| ||||||||
Sbjct 99 GTCTCGTTCGTTATTAAAATTACCCACACAAATTACTCCATGAACGTTGAAAGGCCATGC 40
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
| |||||| |||||| || ||||| |||||| ||||||||
Sbjct 39 ATCACCACTCATAGATTC-AGAAA-AGCTATTAATCTGTC 2
>seq81929
Length=2628
Score = 89.7 bits (98), Expect = 8e-16
Identities = 51/52 (98%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1425 GTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGCA 1374
>seq108742
Length=5608
Score = 87.8 bits (96), Expect = 3e-15
Identities = 79/99 (80%), Gaps = 3/99 (3%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||| ||||||| || || ||||||||||||||||||||| |||| ||||| ||||
Sbjct 3824 GTCGCGTTCGTAATTAAAACTAACCAGACAAATCACTCCACGAACT---AACGGTCATGT 3880
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
| ||||||| | ||| | ||| | ||||||||||||||
Sbjct 3881 ATCACCACCTAAAGATCCGAGATAAAGCTATCAATCTGT 3919
>seq47091
Length=2776
Score = 84.2 bits (92), Expect = 3e-14
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand=Plus/Minus
Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72
|| ||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct 1568 CCTTCATTGTAGCGCGCGTGCAGCCCATGACATCTAAGGGCATCACAGATCTGTTATTG- 1510
Query 73 CTCAAACT 80
||||| ||
Sbjct 1509 CTCAATCT 1502
>seq15237
Length=3442
Score = 82.4 bits (90), Expect = 1e-13
Identities = 54/60 (90%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||| |||||||||| ||||||||| || ||||||| |||| ||||||||||||||||||
Sbjct 2900 GTCTTGTTCGTTATCAGAATTAACCGGAGAAATCACCCCACGAACTAAGAACGGCCATGC 2959
>seq165292
Length=2398
Score = 80.6 bits (88), Expect = 4e-13
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254
||||| |||||||||||||||||||||||| |||| | ||||||||||||| | ||||
Sbjct 2398 TCCACGAACTAAGAACGGCCATGCACCACCCATCATAAATTCAAGAAAGAGCTGTTAATC 2339
Query 255 TGTC 258
||||
Sbjct 2338 TGTC 2335
>seq63670
Length=5285
Score = 78.8 bits (86), Expect = 1e-12
Identities = 76/98 (78%), Gaps = 6/98 (6%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||| |||| ||||||||||||| |||| |||||| | ||| |||||| | ||||||||
Sbjct 1751 GTCACGTTTATTATCGGAATTAATCAGATAAATCATTTCACGAACTAAAACGGGCCATGC 1692
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256
| |||| ||||||| || ||||||| ||||||
Sbjct 1691 AAAACCATCCATAGATTC------GAGCTATTAATCTG 1660
Score = 73.4 bits (80), Expect = 6e-11
Identities = 49/55 (89%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 20 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||| |||| | |||||| | |||||||||||||||||||||||||| ||||
Sbjct 2083 TGTAGCGTGCGTACAGCCCAGGAAATCTAAGGGCATCACAGACCTGTTATGGCCT 2029
>seq144283
Length=6501
Score = 77.0 bits (84), Expect = 5e-12
Identities = 78/101 (77%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|| |||||| ||||||||||||||||||||| ||||| ||| | ||||| ||| | |||
Sbjct 1735 GTTTCGTTCATTATCGGAATTAACCAGACAACTCACTTCACGACCTAAGGACGACAGTGC 1794
Query 219 ACCAC--CACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
|| || ||||| | | || ||||| ||||| | | |||
Sbjct 1795 ACTACTGTACCCAAATACTCGAGAAAATGCTATAATTATGT 1835
>seq58624
Length=2300
Score = 77.0 bits (84), Expect = 5e-12
Identities = 57/67 (85%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||||||| |||||||||||||| | |||||| ||||||| || ||| ||| | ||||
Sbjct 1750 GTCTCGTTCATTATCGGAATTAACTAAACAAATAACTCCACGAAATAAAAACAGTTATGC 1809
Query 219 ACCACCA 225
|||||||
Sbjct 1810 ACCACCA 1816
>seq17079
Length=4736
Score = 77.0 bits (84), Expect = 5e-12
Identities = 52/57 (91%), Gaps = 1/57 (2%)
Strand=Plus/Plus
Query 24 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 80
|||||||||| |||||| |||||||| ||||||||||||||||||||| ||||| ||
Sbjct 1878 GCGCGCGTGCAGCCCAGGACATCTAAAGGCATCACAGACCTGTTATTG-CTCAATCT 1933
>seq78456
Length=2741
Score = 75.2 bits (82), Expect = 2e-11
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217
|| |||||||||||||||||||||| ||||| |||||||| |||||||||| | ||||
Sbjct 2434 GTTTCGTTCGTTATCGGAATTAACCGGACAACTCACTCCATGAACTAAGAACAGTCATG 2492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795357596784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |