Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq49086 116 6e-24 seq84775 107 3e-21 seq46644 104 4e-20 seq9453 104 4e-20 seq186213 96.9 6e-18 seq65221 96.9 6e-18 seq183355 93.3 7e-17 seq81929 89.7 8e-16 seq108742 87.8 3e-15 seq47091 84.2 3e-14 seq15237 82.4 1e-13 seq165292 80.6 4e-13 seq63670 78.8 1e-12 seq144283 77.0 5e-12 seq58624 77.0 5e-12 seq17079 77.0 5e-12 seq78456 75.2 2e-11 >seq49086 Length=13499 Score = 116 bits (128), Expect = 6e-24 Identities = 85/99 (86%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||| |||||||||||||||| |||||||| || ||||||||||||| | Sbjct 1832 GTCTCGTTCGTTATCAGAATTAACCAGACAAAGCACTCCACAAAATAAGAACGGCCATAC 1891 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 ||||| | || || | |||||||| ||||| |||| || Sbjct 1892 ACCACTATCCTTAAATTCAAGAAAAAGCTAATAATCAGT 1930 >seq84775 Length=1749 Score = 107 bits (118), Expect = 3e-21 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG- 217 |||| |||||||| ||||||||||| |||||||||||||| |||||| |||||||||| Sbjct 875 GTCTAATTCGTTATTGGAATTAACCAAACAAATCACTCCACGAACTAAAAACGGCCATGC 816 Query 218 CACCACCACCCATAGAA-TCAAGAAAGAGCTATCAATCTGT 257 |||| ||||||| | || || |||||| ||||| | ||||| Sbjct 815 CACCCCCACCCAAAAAATTCGAGAAAGGGCTATTATTCTGT 775 >seq46644 Length=14789 Score = 104 bits (114), Expect = 4e-20 Identities = 76/87 (87%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225 ||||||| ||||||| ||||||||||||||| || ||| |||||||||||| ||||| || Sbjct 5775 TCGTTATTGGAATTATCCAGACAAATCACTCTACGAACGAAGAACGGCCAT-CACCATCA 5833 Query 226 CCCATAGAATCAAGAAAGAGCTATCAA 252 |||||||| | |||||||||||| || Sbjct 5834 CCCATAGATTTGAGAAAGAGCTATTAA 5860 >seq9453 Length=31705 Score = 104 bits (114), Expect = 4e-20 Identities = 85/103 (83%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA---GAACGGCCA 215 ||||||||||||||||||||||||||||||||| ||||||| |||||| || | | Sbjct 4305 GTCTCGTTCGTTATCGGAATTAACCAGACAAATTACTCCACGAACTAATACAAAGGTTTA 4246 Query 216 TGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 || ||| |||||||||| || | |||||||||| ||||| || Sbjct 4245 TGGCCCAACACCCATAGATTCGATAAAGAGCTATTAATCTATC 4203 >seq186213 Length=1514 Score = 96.9 bits (106), Expect = 6e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||| Sbjct 1338 GTCTCGTTCGTTATCGGAATTATCCAGACAAATTACTCCACGAACTAAGAACGGCCATGC 1279 Query 219 A 219 | Sbjct 1278 A 1278 >seq65221 Length=6602 Score = 96.9 bits (106), Expect = 6e-18 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220 || ||| || | |||||||||||||| |||||| |||| ||||||||| ||||||||| Sbjct 4342 CTTGTTTATTTTTGGAATTAACCAGACCAATCACACCACTAACTAAGAATGGCCATGCAT 4401 Query 221 CACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| ||||| | ||| |||||| |||||||| Sbjct 4402 CACCACCGATAGATCTGATAAAAAGCTATTAATCTGTC 4439 >seq183355 Length=2353 Score = 93.3 bits (102), Expect = 7e-17 Identities = 82/100 (82%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||| ||||| ||| |||||| |||||| ||| ||| |||||||| Sbjct 99 GTCTCGTTCGTTATTAAAATTACCCACACAAATTACTCCATGAACGTTGAAAGGCCATGC 40 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | |||||| |||||| || ||||| |||||| |||||||| Sbjct 39 ATCACCACTCATAGATTC-AGAAA-AGCTATTAATCTGTC 2 >seq81929 Length=2628 Score = 89.7 bits (98), Expect = 8e-16 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1425 GTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGCA 1374 >seq108742 Length=5608 Score = 87.8 bits (96), Expect = 3e-15 Identities = 79/99 (80%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||| || || ||||||||||||||||||||| |||| ||||| |||| Sbjct 3824 GTCGCGTTCGTAATTAAAACTAACCAGACAAATCACTCCACGAACT---AACGGTCATGT 3880 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 | ||||||| | ||| | ||| | |||||||||||||| Sbjct 3881 ATCACCACCTAAAGATCCGAGATAAAGCTATCAATCTGT 3919 >seq47091 Length=2776 Score = 84.2 bits (92), Expect = 3e-14 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||| Sbjct 1568 CCTTCATTGTAGCGCGCGTGCAGCCCATGACATCTAAGGGCATCACAGATCTGTTATTG- 1510 Query 73 CTCAAACT 80 ||||| || Sbjct 1509 CTCAATCT 1502 >seq15237 Length=3442 Score = 82.4 bits (90), Expect = 1e-13 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| |||||||||| ||||||||| || ||||||| |||| |||||||||||||||||| Sbjct 2900 GTCTTGTTCGTTATCAGAATTAACCGGAGAAATCACCCCACGAACTAAGAACGGCCATGC 2959 >seq165292 Length=2398 Score = 80.6 bits (88), Expect = 4e-13 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 ||||| |||||||||||||||||||||||| |||| | ||||||||||||| | |||| Sbjct 2398 TCCACGAACTAAGAACGGCCATGCACCACCCATCATAAATTCAAGAAAGAGCTGTTAATC 2339 Query 255 TGTC 258 |||| Sbjct 2338 TGTC 2335 >seq63670 Length=5285 Score = 78.8 bits (86), Expect = 1e-12 Identities = 76/98 (78%), Gaps = 6/98 (6%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| |||| ||||||||||||| |||| |||||| | ||| |||||| | |||||||| Sbjct 1751 GTCACGTTTATTATCGGAATTAATCAGATAAATCATTTCACGAACTAAAACGGGCCATGC 1692 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 | |||| ||||||| || ||||||| |||||| Sbjct 1691 AAAACCATCCATAGATTC------GAGCTATTAATCTG 1660 Score = 73.4 bits (80), Expect = 6e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 20 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||| |||| | |||||| | |||||||||||||||||||||||||| |||| Sbjct 2083 TGTAGCGTGCGTACAGCCCAGGAAATCTAAGGGCATCACAGACCTGTTATGGCCT 2029 >seq144283 Length=6501 Score = 77.0 bits (84), Expect = 5e-12 Identities = 78/101 (77%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 || |||||| ||||||||||||||||||||| ||||| ||| | ||||| ||| | ||| Sbjct 1735 GTTTCGTTCATTATCGGAATTAACCAGACAACTCACTTCACGACCTAAGGACGACAGTGC 1794 Query 219 ACCAC--CACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 || || ||||| | | || ||||| ||||| | | ||| Sbjct 1795 ACTACTGTACCCAAATACTCGAGAAAATGCTATAATTATGT 1835 >seq58624 Length=2300 Score = 77.0 bits (84), Expect = 5e-12 Identities = 57/67 (85%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||| |||||||||||||| | |||||| ||||||| || ||| ||| | |||| Sbjct 1750 GTCTCGTTCATTATCGGAATTAACTAAACAAATAACTCCACGAAATAAAAACAGTTATGC 1809 Query 219 ACCACCA 225 ||||||| Sbjct 1810 ACCACCA 1816 >seq17079 Length=4736 Score = 77.0 bits (84), Expect = 5e-12 Identities = 52/57 (91%), Gaps = 1/57 (2%) Strand=Plus/Plus Query 24 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 80 |||||||||| |||||| |||||||| ||||||||||||||||||||| ||||| || Sbjct 1878 GCGCGCGTGCAGCCCAGGACATCTAAAGGCATCACAGACCTGTTATTG-CTCAATCT 1933 >seq78456 Length=2741 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 || |||||||||||||||||||||| ||||| |||||||| |||||||||| | |||| Sbjct 2434 GTTTCGTTCGTTATCGGAATTAACCGGACAACTCACTCCATGAACTAAGAACAGTCATG 2492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795357596784