Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq17772 172 9e-41 seq103589 165 1e-38 seq11993 163 5e-38 seq157841 147 4e-33 seq68428 147 4e-33 seq40738 145 1e-32 seq7590 129 1e-27 seq1556 123 4e-26 seq141686 120 5e-25 seq12795 113 8e-23 seq34609 109 9e-22 seq38328 96.9 6e-18 seq36578 95.1 2e-17 seq21743 89.7 9e-16 seq100119 87.8 3e-15 seq57257 87.8 3e-15 seq116832 75.2 2e-11 >seq17772 Length=7472 Score = 172 bits (190), Expect = 9e-41 Identities = 129/149 (87%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||| ||||||| |||||||||| |||||||||| || |||| Sbjct 5475 TCATCAGTAGGGTAAAACTAACATGTCTCACGACGGTCTAAGCCCAGCTCACATTTCCTA 5416 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | ||||||||||| |||||||| ||||| |||||| ||||||||||||||||| Sbjct 5415 GCA-CGGGTGAACAATTCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGA 5357 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||| ||||| ||| Sbjct 5356 -ATCGAAGGATCAAAAAGCGACGTCACTA 5329 >seq103589 Length=6276 Score = 165 bits (182), Expect = 1e-38 Identities = 175/227 (77%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 55 GTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCT 114 ||| || ||||||||||||| | |||||||||||| || ||||| |||||| ||||||| Sbjct 4422 GTCGCACGACGGTCTAAACCAAACTCACGTTCCCTTGTA-TGGGTCAACAATTCAACGCT 4364 Query 115 TACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGT 174 | |||| |||| |||||| ||| ||||||||| |||||||||||| | |||| Sbjct 4363 TTGTCAATTTCGCTTTATGATGATATGAAAAGCCGACATTAAAGGATCAAAAACCTACGT 4304 Query 175 CGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 | |||| ||| |||||| || ||| || |||||||||||||| ||||||| |||| Sbjct 4303 CACTATAAACACTTGGCCGCTTTAAGACACTTATCCCTGTGGTATCTTTTCTAATACCTT 4244 Query 235 TAGCCTCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTT 279 | | |||||| | | | | | ||||||||||||||||| | ||| Sbjct 4243 TTG-CTCAAAACTCTTTAATGCCAAAAGGATCGATAGGCCATATTTT 4198 >seq11993 Length=13698 Score = 163 bits (180), Expect = 5e-38 Identities = 177/231 (77%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 45 AAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104 |||||||||||||||| |||||||| || ||||||||| |||||| | |||| |||||| Sbjct 11360 AAACTAACCTGTCTCACGACGGTCTGAATCCAGCTCACATTCCCT-TGCGTGGATGAACA 11302 Query 105 ATCCAACGCTTACCGAATTCTGCTTCG-GTATGATAGGAAGAGCCGACATCGAAGGATCA 163 |||||| |||| ||||| ||||| | |||||| ||| ||| ||||||||| ||||| Sbjct 11301 ATCCAATGCTTGGTGAATTTAGCTTCTTGAATGATATGAAAAGCTGACATCGAAAGATCA 11242 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 |||||| | | |||| ||||||||| ||||||| | ||||| || |||||||| Sbjct 11241 AAAAGCTAGGCTGCTAATGACGCTTGGCCATCACAAGCTAATTATCTCTACCGTAACTTT 11182 Query 224 TCTGGCACCTCTAGCCTCAAA-TTTCGAGGGACTAAAGGATCGATAGGCCA 273 ||| ||| ||| || ||| | | | | | |||||||| |||| ||| Sbjct 11181 TCTAACACATCTTGCTGAAAACTCTTTAATGCCAAAAGGATCAATAGACCA 11131 >seq157841 Length=1462 Score = 147 bits (162), Expect = 4e-33 Identities = 108/126 (86%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 ||||| |||||| |||||| ||||| ||||||||||||||||||||||||||| |||| Sbjct 950 GAATTTTGCTTCACAATGATAAGAAGAACCGACATCGAAGGATCAAAAAGCAACGACGCT 891 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||| || ||||| || |||||||| ||||||||||| ||||||||| |||| |||| || Sbjct 890 ATGAGCGGTTGGCCGCTACAAGCCAATTATCCCTGTGATAACTTTTCCGGCATCTCTTGC 831 Query 239 CTCAAA 244 | ||| Sbjct 830 TTAAAA 825 >seq68428 Length=1600 Score = 147 bits (162), Expect = 4e-33 Identities = 108/126 (86%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 ||||| |||||| |||||| ||||| ||||||||||||||||||||||||||| |||| Sbjct 739 GAATTTTGCTTCACAATGATAAGAAGAACCGACATCGAAGGATCAAAAAGCAACGACGCT 680 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||| || ||||| || |||||||| ||||||||||| ||||||||| |||| |||| || Sbjct 679 ATGAGCGGTTGGCCGCTACAAGCCAATTATCCCTGTGATAACTTTTCCGGCATCTCTTGC 620 Query 239 CTCAAA 244 | ||| Sbjct 619 TTAAAA 614 >seq40738 Length=2232 Score = 145 bits (160), Expect = 1e-32 Identities = 133/167 (80%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 644 TCATCATTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTTACGTTCCCT- 702 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | | | ||| ||||||||||| ||| | || ||| |||||| ||||| | | Sbjct 703 TACATTGAAGAATCATCCAACGCTTGGTGAAATTTGTTTCATAATGATAAAAAGAGGCAA 762 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 ||||||||| | |||| || ||| |||||||||| ||| | ||||| Sbjct 763 CATCGAAGGTTTAAAATGCGACGAAGCTATGAACGGTTGACCGCCAC 809 >seq7590 Length=5798 Score = 129 bits (142), Expect = 1e-27 Identities = 120/151 (79%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||| ||| ||||||||||||||||||||||| | ||| |||||||||| |||||| Sbjct 150 TCATCAGAAGGATAAAACTAACCTGTCTCATGACGATTTAAGCCCAGCTCACATTCCCTT 209 Query 91 TTAGTGGGTGAACAATCCAACGCTTAC-CGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||||||| || |||| |||||| | ||| |||||||||||||||| Sbjct 210 GCATANNNNTAACAATCTAA-TTTTACTCGAATTTTACTTTACAATGATAGGAAGAGCCG 268 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 | |||||||||| ||||||| | |||||||| Sbjct 269 ATATCGAAGGATTAAAAAGCGAAGTCGCTAT 299 >seq1556 Length=16089 Score = 123 bits (136), Expect = 4e-26 Identities = 103/125 (82%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 || ||||||||||||||||| ||||| | || | |||||||||||| ||||||||| | Sbjct 3673 ATAAGTAGGGTAAAACTAACTTGTCTTACGATGAACTAAACCCAGCTAACGTTCCCT-TG 3731 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||||||||||||||||||| ||||| ||| | |||||||||| |||||||| Sbjct 3732 CTTGGGTGAACAATCCAACGCTTGGTGAATTTAGCTACACAATGATAGGAATAGCCGACA 3791 Query 153 TCGAA 157 ||||| Sbjct 3792 TCGAA 3796 >seq141686 Length=2279 Score = 120 bits (132), Expect = 5e-25 Identities = 112/140 (80%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 || |||||| |||||||||||||||||||||||||| | ||||||| || ||||||| Sbjct 867 ATTATAGGAGGAGCCGACATCGAAGGATCAAAAAGCGATATCGCTATTAATGCTTGGCCA 808 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGAGG 252 ||| |||| |||||| |||||||||||||||| ||||| | | ||| | | || Sbjct 807 CCAAAAGCGAGTTAT-AGTGTGGTAACTTTTCTGACACCTATTGGTAAAAACTCTTGAAT 749 Query 253 GACTAAAGGATCGATAGGCC 272 | | |||||||||||||||| Sbjct 748 GCCAAAAGGATCGATAGGCC 729 >seq12795 Length=19460 Score = 113 bits (124), Expect = 8e-23 Identities = 108/137 (79%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||| |||||||||||||||| | ||| |||||||||| ||||||||| || ||| Sbjct 17231 TCATCAGAAGGGTAAAACTAACCTATTTCACGACGGTCTAAGCCCAGCTCATATTTCCT- 17289 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | || | ||||| |||||||| ||||| |||||| ||||||| |||| | | Sbjct 17290 TGCATGCATAAACAAAACAACGCTTGGTGAATTTTGCTTCACAATGATAGATAGAGACTA 17349 Query 151 CATCGAAGGATCAAAAA 167 ||| ||||||||||||| Sbjct 17350 CATTGAAGGATCAAAAA 17366 >seq34609 Length=3128 Score = 109 bits (120), Expect = 9e-22 Identities = 72/80 (90%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164 ||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 522 ATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAA 581 Query 165 AAAGCAACGTCGCTATGAAC 184 ||||| |||||||||||||| Sbjct 582 AAAGCGACGTCGCTATGAAC 601 >seq38328 Length=1526 Score = 96.9 bits (106), Expect = 6e-18 Identities = 82/100 (82%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 76 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135 ||||||||||| ||| ||||||||||||||||||||| ||| |||||| || Sbjct 1429 AGCTCACGTTC--TATGCATGGGTGAACAATCCAACGCTTGGTAGATTTTGCTTCACAAT 1486 Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTC 175 |||||||||| | || |||||||||||||||||| ||||| Sbjct 1487 GATAGGAAGAACAGAAATCGAAGGATCAAAAAGCGACGTC 1526 >seq36578 Length=6344 Score = 95.1 bits (104), Expect = 2e-17 Identities = 78/94 (83%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 || || |||||||| || |||||||||| |||||||||| ||| ||||||||||| || Sbjct 2753 TCAAATGATCAAAA-GCGACGTCGCTATAAACGCTTGGCCACCATCAGCCAGTTATCTCT 2811 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246 |||||| |||||||| ||||||| || ||||| Sbjct 2812 GTGGTAGCTTTTCTGACACCTCTTGCTAAAAATT 2845 >seq21743 Length=12337 Score = 89.7 bits (98), Expect = 9e-16 Identities = 139/203 (68%), Gaps = 11/203 (5%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 || || ||||| ||||||||||||| |||||||||| ||||||| || Sbjct 4489 AGAAGAGTAAAGCTAACCTGTCTCACGACGGTCTAAGCCCAGCTNNNNNNNNNNNNAGGT 4548 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||| |||||||||||| | ||| | ||| | |||| |||||| || Sbjct 4549 AAATGAATAATCCAACGCTTGGTGCATTTTAATTC---ACATTAGGGAGAGCCAAC---- 4601 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||| |||| ||||||| | |||||| || || | ||||||| ||| || Sbjct 4602 ----ATCAAAAAGCGACGTTGCTATGAGCACTTGGCCGCTACCATTCAGTTATTCCTTTG 4657 Query 216 GTAACTTTTCTGGCACCTCTAGC 238 | ||||||| |||| || || Sbjct 4658 ACTATTTTTCTGACACCCCTCGC 4680 >seq100119 Length=1074 Score = 87.8 bits (96), Expect = 3e-15 Identities = 83/105 (79%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 101 AACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGA 160 ||||| |||||||| |||| |||||| ||||||| |||| | |||| |||||| Sbjct 7 AACAAAACAACGCTTGGTGAATCTTGCTTCACAATGATAGATAGAGACTACATTGAAGGA 66 Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGT 205 ||||||| | ||||||||||| ||||||| | ||||||||| || Sbjct 67 TCAAAAACCGACGTCGCTATG-ACGCTTGACCACCACAAGCCTGT 110 >seq57257 Length=4191 Score = 87.8 bits (96), Expect = 3e-15 Identities = 80/100 (80%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 |||| |||||||| | |||| | |||| ||||||||||| | || ||| || | | Sbjct 133 CAATTCAACGCTTTGCAAATTTTACTTCACGATGATAGGAAGTTCAGAAATCTCAGTAAC 192 Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCC 202 |||| | |||||||||||||||||||| |||||||||||| Sbjct 193 AAAA-GTAACGTCGCTATGAACGCTTGACTGCCACAAGCC 231 >seq116832 Length=2326 Score = 75.2 bits (82), Expect = 2e-11 Identities = 61/73 (84%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 57 CTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116 |||| |||||||||||||||||||||||||| | | |||||||||||||||| |||| Sbjct 162 CTCACGACGGTCTAAACCCAGCTCACGTTCCAT-TGCATGGGTGAACAATCCAATGCTTG 104 Query 117 CCGAATTCTGCTT 129 ||||| | ||| Sbjct 103 GTGAATTTTACTT 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852803433984