Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq70032 82.4 1e-13 >seq70032 Length=1728 Score = 82.4 bits (90), Expect = 1e-13 Identities = 107/148 (72%), Gaps = 10/148 (7%) Strand=Plus/Minus Query 88 CACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT 147 ||||| || ||| ||| |||| |||| | ||||| || || ||||||||| || | Sbjct 1179 CACCACAGATTTACCCAACCCGATCCTTTTGTACTCAGATTAGTTCCTCTCAACCTTTCG 1120 Query 148 ACGCCCACGACGGATAGGGACCGAACTGTC-----TCGCGAC-----GTTCTGAACCCAG 197 ||||| | | ||||| ||||||| ||| || |||| ||| ||| || || Sbjct 1119 ACGCCTGCAATCGATAGAAACCGAACAGTCGGTTTTCCCGACACAGGGTTTTGACCCGAG 1060 Query 198 CTCGCGTGCCTCTTTAATGGGCGAACAG 225 ||||||||||| ||||||||| |||||| Sbjct 1059 CTCGCGTGCCTTTTTAATGGGTGAACAG 1032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779386560704