Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq44000 98.7 3e-16 >seq44000 Length=9523 Score = 98.7 bits (108), Expect = 3e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACT 2832 |||||||| ||||| ||||| ||||||||| || || || ||| | | |||| Sbjct 8771 GTATCACATCGTTCCGGTGAGACTGAAGATACATTCATTGCCGATTTGGTTGTTGGGTTG 8830 Query 2833 AACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAAC 2892 | |||| ||||||||||| ||| || | ||| | || ||| ||||||||||||| Sbjct 8831 AGTACTGGACAAATTAAGACTGGTGCACCATGCCGTTCAGAACGTCTTGCTAAATACAAT 8890 Query 2893 CAATTGCTTCGTATCGAAGACCAACTTGG 2921 ||| | |||||||||||||| ||||||| Sbjct 8891 CAAATTCTTCGTATCGAAGAAGAACTTGG 8919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155692149230016