Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20cornetzi_20[refseq_20GCF_5F001594075.1_202016-03-25] 19,761 sequences; 369,438,293 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq19723 219 6e-55 seq16224 199 6e-49 seq16010 196 7e-48 >seq19723 Length=60925 Score = 219 bits (242), Expect = 6e-55 Identities = 209/258 (81%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||| | Sbjct 30202 GTACAAAGGGCAGGGACGTAATCAACGCGAGCGT-ATGACTCGCGCTTACTGGGAATT-C 30145 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | ||||| | || Sbjct 30144 CTCGTTCATGGGAAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAACGGGTT 30085 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || | || || ||| | | ||||||||||||||||||| Sbjct 30084 ACCCGGGCCTTTCGGCCAGGGA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 30028 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 30027 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 29971 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 29970 AGCCGCCTGTCCCTCTAA 29953 Score = 219 bits (242), Expect = 6e-55 Identities = 209/258 (81%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||| | Sbjct 53737 GTACAAAGGGCAGGGACGTAATCAACGCGAGCGT-ATGACTCGCGCTTACTGGGAATT-C 53794 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | ||||| | || Sbjct 53795 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAACGGGTT 53854 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || | || || ||| | | ||||||||||||||||||| Sbjct 53855 ACCCGGGCCTTTCGGCCAGGGA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 53911 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 53912 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 53968 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 53969 AGCCGCCTGTCCCTCTAA 53986 >seq16224 Length=27884 Score = 199 bits (220), Expect = 6e-49 Identities = 206/259 (80%), Gaps = 13/259 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||| |||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 7148 GTACAAAGGGCAAAGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 7205 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | |||| |||||| | ||||| | ||| | | | ||||| | || Sbjct 7206 CTCGTTCATGGGGAACAGTTGCAAGCCCCAATCCCTAGCACAAAGGAGGTTCAACGGGTT 7265 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| || ||| ||||||| | | | || || ||| | | ||||||||||||||||||| Sbjct 7266 ACCTGGGCCTTTCGGCCAGG---AAACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 7322 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 7323 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 7379 Query 239 AG--GCCATCTCCCTCGAA 255 || ||| | |||||| || Sbjct 7380 AGCAGCC-TGTCCCTCTAA 7397 >seq16010 Length=70657 Score = 196 bits (216), Expect = 7e-48 Identities = 204/258 (79%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||| |||| ||||||||||||| ||| ||||||||| | ||||| | Sbjct 21167 GTACAAAGGGCAGGGTCGTAATCAACGCGAGCTT-ATGCTTCGCGCTTATTGAGAATTGC 21225 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 ||||| | | ||||||||||| | ||||| | ||||| | | ||||| | ||| Sbjct 21226 -TCGTTCATGGGGAACAATTGCAAGTCCCAATCCCTAGCACGAAGGAGGTTCAACGGATT 21284 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || | || || ||| | | ||||| ||||||||||||| Sbjct 21285 ACCCGGGCCTTTCGGCCAGGGA---ACACACGCTGATTCCTTCAGTATAGCGCGCGTGCG 21341 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 21342 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 21398 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 21399 AGCCGCCTGTCCCTCTAA 21416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751856041115