Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20cornetzi_20[refseq_20GCF_5F001594075.1_202016-03-25] 19,761 sequences; 369,438,293 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq18994 215 2e-53 seq19723 140 1e-30 seq16010 138 5e-30 seq15002 120 1e-24 seq15556 109 2e-21 seq14979 109 2e-21 >seq18994 Length=1140 Score = 215 bits (238), Expect = 2e-53 Identities = 149/169 (88%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||| ||||||| |||||| | | |||||||| Sbjct 818 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAACTCCATCTAAAGC 877 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||| | ||||||| |||| ||||||||||||| |||| Sbjct 878 TAAATACCGGCGAGAGACCGATAGTGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTT 937 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 |||||||||||||||| || ||||||||||| |||||||||| |||||| Sbjct 938 TGGAAAGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTG 986 >seq19723 Length=60925 Score = 140 bits (154), Expect = 1e-30 Identities = 119/144 (83%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||| ||| ||||| ||||||| Sbjct 52107 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTTCATCTAAGGCTAAAT 52048 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 52047 AC-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 51989 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 51988 GAGAGAGTTCAAGAGTACGTGAAA 51965 Score = 131 bits (144), Expect = 7e-28 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 51261 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 51202 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||| Sbjct 51201 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACAGGGT 51142 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 51141 ATAGGGGCGA 51132 >seq16010 Length=70657 Score = 138 bits (152), Expect = 5e-30 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| |||||||||||||| |||| |||||||| | | ||| ||||||| Sbjct 19316 GAGTCGGGTTGCTTGAGAATGCAGCTCTAAGTGGGTGGTAAATTCCATATAAGGCTAAAT 19257 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| || |||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 19256 A-CGACCACGAAACCGATAGCGAACAAGTATCGTGAGGGAAAGTTGAAAAGAACTTTGAA 19198 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||||||| || || |||||||| ||| || || || Sbjct 19197 GAGAGAGTTCAAGAGTACGTGAAACCGTTCAAGGGTAA 19160 Score = 127 bits (140), Expect = 9e-27 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 18560 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 18501 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||| | ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 18500 GGAACCCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 18441 Query 674 ATAGGGGCGA 683 ||| |||||| Sbjct 18440 ATAAGGGCGA 18431 >seq15002 Length=35249 Score = 120 bits (132), Expect = 1e-24 Identities = 114/143 (80%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 41 AGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA 100 ||||| |||| ||| || ||||||||||| ||| |||||| | | ||||| ||||||| Sbjct 13438 AGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGATGGTAAACTCCATCTAAGACTAAATA 13497 Query 101 TTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||| |||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 13498 -CGACCACGAGACCAATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 13556 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 13557 AGAGAGTTCAAGAGTACGTGAAA 13579 >seq15556 Length=7102 Score = 109 bits (120), Expect = 2e-21 Identities = 112/144 (78%), Gaps = 8/144 (6%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||| | | |||||||| Sbjct 5681 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAATTGGGTGGTAAACTCC------AGCTAAAT 5628 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| | ||||| |||| ||||| ||||||| |||||| | Sbjct 5627 AC-GACCACGAGACCGATAGCGAATAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 5569 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 | |||||| || || |||||||| Sbjct 5568 GATAGAGTTCAAGAGTACGTGAAA 5545 >seq14979 Length=33079 Score = 109 bits (120), Expect = 2e-21 Identities = 83/98 (85%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||||||||||||||||||||||||||||| ||| |||| ||| |||||| ||| Sbjct 9212 GTTGGGACCCGAAAGATGGTGAACTATGCCTTGTCAGGACGAAGTCAGGGGAAACCCTGA 9271 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662 |||||| || |||| ||||| |||||||||||||||| Sbjct 9272 TGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGT 9309 Score = 98.7 bits (108), Expect = 4e-18 Identities = 94/118 (80%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| ||| |||||| | | | ||| ||||||| Sbjct 4437 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGATGGTAAACTCCATGTAAGGCTAAAT 4496 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| | |||| Sbjct 4497 A-CGACCACGAGACCGATAGCGAACAAGTATCGTGAGGGAAAGTTGAAAAGAATTTTG 4553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079576126550