Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20cornetzi_20[refseq_20GCF_5F001594075.1_202016-03-25] 19,761 sequences; 369,438,293 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq19723 214 3e-53 seq19151 206 4e-51 seq16224 199 6e-49 seq16010 199 6e-49 >seq19723 Length=60925 Score = 214 bits (236), Expect = 3e-53 Identities = 217/292 (74%), Gaps = 47/292 (16%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30050 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 29991 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-------------- 117 | |||| || | |||| |||||| |||||||||||||| Sbjct 29990 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 29933 Query 118 ---------AGCCACCAACCATAGTCGATGG----------------------GGCTATT 146 | ||||| || || || || | ||||| Sbjct 29932 GTAGTAAAAACCCACCGGCCGGAGCCGGGGGCCTTCGCGATACCATAAGGTATGCCTATT 29873 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 29872 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 29813 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 29812 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 29761 Score = 212 bits (234), Expect = 1e-52 Identities = 221/293 (75%), Gaps = 49/293 (17%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 53889 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 53948 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------- 115 | |||| || | |||| |||||| |||||||||||||| Sbjct 53949 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 54006 Query 116 --------------CCAGCC--ACCAA----CCATAGTCGAT-------GG---GGCTAT 145 || ||| | || || | | |||| || | |||| Sbjct 54007 GTAGTAAAAACTCACCGGCCGAAGCAGGGGGCCTTCG-CGATACCATAAGGTACGCCTAT 54065 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 54066 TTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTA 54125 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 54126 AGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 54178 >seq19151 Length=596 Score = 206 bits (228), Expect = 4e-51 Identities = 117/119 (98%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 140 GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCAC 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13 GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCAC 72 Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 73 CAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAAAGAGCTATCAATCTGTC 131 >seq16224 Length=27884 Score = 199 bits (220), Expect = 6e-49 Identities = 214/292 (73%), Gaps = 47/292 (16%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7300 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 7359 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-------------- 117 | |||| || | |||| ||||| |||||||||||||| Sbjct 7360 C-TCAATCT-CGTGCGGCTAGAAGCAGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 7417 Query 118 ---------AGCCACCAACCATAGTCGATGG----------------------GGCTATT 146 | ||||| || || || || | ||||| Sbjct 7418 GTAGTAAAAACCCACCGGCCGAAGCCGGAGGCCTTCGCGATACCTTAAGGTACGCCTATT 7477 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||| | || |||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 7478 TAGCAAGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTTCACCAACTAA 7537 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 7538 GAACGGCCATGCACCACCACCCAACGAATCAAGAAAGAGCTATCAATCTGTC 7589 >seq16010 Length=70657 Score = 199 bits (220), Expect = 6e-49 Identities = 218/293 (74%), Gaps = 49/293 (17%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21319 TCCTTCAGTATAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 21378 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------- 115 | |||| || | |||| |||||| |||||||||||||| Sbjct 21379 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 21436 Query 116 --------------CCAGCC--ACCAA----CCATAGTCGAT-------GG---GGCTAT 145 || ||| | || || | | |||| || | |||| Sbjct 21437 GTAGTAAAAACTCACCGGCCGAAGCAGGGGGCCTTCG-CGATACCATAAGGTACGCCTAT 21495 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||||||| || |||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 21496 TTAGCAGGCTAGAGTCTTTTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTA 21555 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 21556 AGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 21608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796647464841