Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20cornetzi_20[refseq_20GCF_5F001594075.1_202016-03-25] 19,761 sequences; 369,438,293 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq16224 459 5e-127 seq15856 334 1e-89 seq16033 313 4e-83 seq14979 307 2e-81 seq15002 304 2e-80 seq19520 300 3e-79 seq16010 289 5e-76 seq15158 183 5e-44 seq18873 78.8 2e-12 seq16256 78.8 2e-12 seq19521 77.0 6e-12 seq15731 73.4 7e-11 seq15077 73.4 7e-11 >seq16224 Length=27884 Score = 459 bits (508), Expect = 5e-127 Identities = 280/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||| ||| | | || || ||||||||||||||||||||||||||| Sbjct 828 TACTAAGTTCAATTACTATTACGACAACACTCCATCAGTAGGGTAAAACTAACCTGTCTC 887 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 888 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 947 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 948 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 1007 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1008 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 1067 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1068 TCAAACTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1123 >seq15856 Length=16191 Score = 334 bits (370), Expect = 1e-89 Identities = 246/283 (87%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| ||| |||||||||||||||||||||||||||||| Sbjct 4536 TACTGAGCAGGATTACTATTGCAATGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 4595 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || | ||||||||||||| |||||| || Sbjct 4596 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 4655 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4656 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 4715 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 4716 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 4775 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 4776 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 4816 >seq16033 Length=35527 Score = 313 bits (346), Expect = 4e-83 Identities = 220/251 (88%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 24732 GTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAATCCAGCTCACGTTCCCT 24673 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 || | ||||||||||||| ||||||| |||||||||||||| |||||||||| ||||| Sbjct 24672 GTTGGCGGGTGAACAATCCGACGCTTAGCGAATTCTGCTTCGCAATGATAGGAAAAGCCG 24613 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 24612 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 24553 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 |||||||||||||||||| ||| ||| || ||| | | | ||||||||||||| Sbjct 24552 CCTGTGGTAACTTTTCTGACACGTCTTGCTGAAAACTCTTTAAGCCAAAAGGATCGATAG 24493 Query 270 GCCACACTTTC 280 || ||||| Sbjct 24492 ACCGTGCTTTC 24482 >seq14979 Length=33079 Score = 307 bits (340), Expect = 2e-81 Identities = 240/283 (85%), Gaps = 5/283 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||||||||||||||||||||| ||||||| Sbjct 892 TACTGAGCAGGATTACTATCGTAATGACTAGTCATCAGTAGGGTAAAACTAATCTGTCTC 833 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||| || || | || |||||||| | |||||| || Sbjct 832 ACGACGGTCTAAACCCAGCTCACGTTCGCTGTTGGCGGATGAACAATACGACGCTTGACG 773 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 772 AATTCTGCTTCGCAATGATAGAAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 713 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 712 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 653 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 652 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 612 >seq15002 Length=35249 Score = 304 bits (336), Expect = 2e-80 Identities = 240/283 (85%), Gaps = 6/283 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||||| ||||| || | ||| |||||||||||||||||||||||||||||| Sbjct 2585 TACTAAGCAAGATTACTATCGCAATGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 2526 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || | |||| |||||||| |||||| || Sbjct 2525 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTAAACAATCCGACGCTTGGCG 2466 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||| |||||| |||| ||||||||| Sbjct 2465 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAAGATCAAGAAGCGACGTCGCTA 2406 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| | |||| || Sbjct 2405 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGAC-TCTCTTGCT 2347 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 2346 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 2306 >seq19520 Length=54271 Score = 300 bits (332), Expect = 3e-79 Identities = 233/274 (85%), Gaps = 5/274 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||||||||||||||||||||||||||||| Sbjct 48620 TACTGAGCAGGATTACTATCGCAATGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 48561 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || | | ||||||||||| |||||| || Sbjct 48560 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGAGTGAACAATCCGACGCTTGGCG 48501 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 48500 AATTCTGCTTCGCAATGATAGAAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 48441 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| |||||||||||||||| |||||||||| |||||| |||||| ||| Sbjct 48440 TGAACGCTTGGCCGCCACAAGCCAGTTATTTCTGTGGTAACCTTTCTGACACCTCCTGCC 48381 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGC 271 ||| ||| | | | |||||| |||||||| Sbjct 48380 GAAAACTCTTCAA--GCCAAAAGGACCGATAGGC 48349 >seq16010 Length=70657 Score = 289 bits (320), Expect = 5e-76 Identities = 208/238 (87%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 45 AAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104 |||||||||||||||| | |||||||||||||||||| ||||||| || | ||||||||| Sbjct 46005 AAACTAACCTGTCTCACGGCGGTCTAAACCCAGCTCATGTTCCCTGTTGGCGGGTGAACA 46064 Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164 |||| |||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 46065 ATCCGACGCTTGGCGAATTCTGCTTCGCAGTGATAGGAAGAGCCGACATCGAAGGATCAA 46124 Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 46125 AAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 46184 Query 225 CTGGCACCTCTAGCCTCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||||||| || ||| ||| | | | |||||||||||||||| ||||| Sbjct 46185 CTGACACCTCTTGCTGAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 46240 >seq15158 Length=123414 Score = 183 bits (202), Expect = 5e-44 Identities = 131/149 (88%), Gaps = 4/149 (3%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 12028 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCG 12087 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA--TTTCGAG 251 |||||||||||||||||||||||||||||||||| ||||||| || ||| ||| | Sbjct 12088 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTAAAAACTCTTCAA- 12146 Query 252 GGACTAAAGGATCGATAGGCCACACTTTC 280 | | |||||||||||||||| ||||| Sbjct 12147 -GCCAAAAGGATCGATAGGCCGTGCTTTC 12174 >seq18873 Length=559328 Score = 78.8 bits (86), Expect = 2e-12 Identities = 71/88 (81%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||||||||||||||||||||||||||||| Sbjct 371525 TACTGAGCAGGATTACTATCGCAATGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 371466 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCC 87 | ||||||||||||| | || | |||| Sbjct 371465 ACGACGGTCTAAACCTAACTTTCTTTCC 371438 >seq16256 Length=591767 Score = 78.8 bits (86), Expect = 2e-12 Identities = 71/88 (81%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||||||||||||||||||||||||||||| Sbjct 572871 TACTGAGCAGGATTACTATCGCAATGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 572812 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCC 87 | ||||||||||||| | || | |||| Sbjct 572811 ACGACGGTCTAAACCTAACTTTCTTTCC 572784 >seq19521 Length=1010823 Score = 77.0 bits (84), Expect = 6e-12 Identities = 62/74 (84%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||||||||||||||||||||||||||||| Sbjct 394728 TACTGAGCAGGATTACTATCGCAATGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 394669 Query 60 ATGACGGTCTAAAC 73 | |||||||||||| Sbjct 394668 ACGACGGTCTAAAC 394655 >seq15731 Length=55044 Score = 73.4 bits (80), Expect = 7e-11 Identities = 60/72 (83%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||||||||||||||||||||||||||||| Sbjct 14665 TACTGAGCAGGATTACTATCGCAATGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 14606 Query 60 ATGACGGTCTAA 71 | |||||||||| Sbjct 14605 ACGACGGTCTAA 14594 >seq15077 Length=31438 Score = 73.4 bits (80), Expect = 7e-11 Identities = 60/72 (83%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||||||||||||||||||||||||||||| Sbjct 10086 TACTGAGCAGGATTACTATCGCAATGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 10027 Query 60 ATGACGGTCTAA 71 | |||||||||| Sbjct 10026 ACGACGGTCTAA 10015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854231162016