Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20cornetzi_20[refseq_20GCF_5F001594075.1_202016-03-25] 19,761 sequences; 369,438,293 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq19723 77.0 8e-12 seq18994 73.4 1e-10 >seq19723 Length=60925 Score = 77.0 bits (84), Expect = 8e-12 Identities = 80/104 (77%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 51961 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 52019 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGA 373 ||| |||| ||||||||| || |||||||||||| || || Sbjct 52020 ACTTGTTCGCTATCGGTCTCGTGGTCGTATTTAGCCTTAGATGA 52063 >seq18994 Length=1140 Score = 73.4 bits (80), Expect = 1e-10 Identities = 75/97 (77%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 274 TTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTA 333 ||||| | || ||| |||| | | ||| ||||||||| ||||||||||||||||| Sbjct 965 TTTCACGTACTGTTTAACTCTCTT-TCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTT 907 Query 334 GTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 |||||||||||||| || ||||||||| || || Sbjct 906 GTTCACTATCGGTCTCTCGCCGGTATTTAGCTTTAGA 870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241354647424