Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20cornetzi_20[refseq_20GCF_5F001594075.1_202016-03-25] 19,761 sequences; 369,438,293 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq19723 89.7 3e-16 seq16010 73.4 2e-11 >seq19723 Length=60925 Score = 89.7 bits (98), Expect = 3e-16 Identities = 74/85 (87%), Gaps = 4/85 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| | ||||| ||||||||| ||||||||||| |||||||||| Sbjct 30251 TCCGAA-GACCTCACTAAATC-TTTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 30195 Query 99 GGCAGGGACGTAATACAACGCAAGC 123 |||||||||||||| |||||| ||| Sbjct 30194 GGCAGGGACGTAAT-CAACGCGAGC 30171 Score = 80.6 bits (88), Expect = 2e-13 Identities = 72/85 (85%), Gaps = 4/85 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| |||||||| || |||||||||| Sbjct 53688 TCCGAA-GACCTCACTAAATTATT-CAATCGGTAGTA-GCGACGGGAGGTGTGTACAAAG 53744 Query 99 GGCAGGGACGTAATACAACGCAAGC 123 |||||||||||||| |||||| ||| Sbjct 53745 GGCAGGGACGTAAT-CAACGCGAGC 53768 >seq16010 Length=70657 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||| || |||| || ||||||||| | |||||| || ||||||||||||||||| || Sbjct 21127 CTCACAAAATCATT-CAATCGGTAGTA-GAGACGGGTGGTGTGTACAAAGGGCAGGGTCG 21184 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 21185 TAAT-CAACGCGAGCT 21199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300744273980