Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20cornetzi_20[refseq_20GCF_5F001594075.1_202016-03-25] 19,761 sequences; 369,438,293 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq19151 156 4e-36 seq16224 102 8e-20 seq16010 93.3 4e-17 seq17022 77.0 3e-12 >seq19151 Length=596 Score = 156 bits (172), Expect = 4e-36 Identities = 126/150 (84%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 39 AAAGCAGGCCTTTGCTCGAATACATTACCATGGAATAATAGAATAGGACG-TGCGGTTCT 97 ||||||||||| ||| |||||||||| |||||||||||||||||||||| ||||||||| Sbjct 596 AAAGCAGGCCTATGCCTGAATACATTAGCATGGAATAATAGAATAGGACGATGCGGTTCT 537 Query 98 ATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTA 157 ||||||| ||||||||| || |||||||||| |||| ||| ||| ||||| | ||| Sbjct 536 ATTTTGTTGGTTTCTAGAGTCG-CCGTAATGATTAATAGGGACAGTTGGGGGCATTGGTA 478 Query 158 TTCAATTGTCAAAGGTGAAATTCTTGGATT 187 || | | | | |||||||||||||||||| Sbjct 477 TTGAGTCGCTAGAGGTGAAATTCTTGGATT 448 >seq16224 Length=27884 Score = 102 bits (112), Expect = 8e-20 Identities = 137/185 (74%), Gaps = 12/185 (6%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTAC 66 || ||||||||| | ||||||||| | | ||||||||| | | || |||||| | | Sbjct 8086 ACGTTTACTTTGTACAAATTAGAGTGCTTAAAGCAGGCTATCCTCGCCTGAATAC--TGC 8029 Query 67 ---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC- 122 ||||||| ||| |||||||| | |||||||||||||| ||||| | ||| | || Sbjct 8028 GTGCATGGAACAATGGAATAGGAACT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 7971 Query 123 -GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||| || ||||| | ||||| || | |||||||||||| Sbjct 7970 GGTAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 7911 Query 182 TGGAT 186 ||||| Sbjct 7910 TGGAT 7906 >seq16010 Length=70657 Score = 93.3 bits (102), Expect = 4e-17 Identities = 135/185 (73%), Gaps = 12/185 (6%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTAC 66 || ||||||||||| ||||||||| | | ||||||||| | | || |||||| | | Sbjct 22105 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCAATCCTCGCCTGAATAC--TGC 22048 Query 67 ---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA--CCGCC 121 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| || Sbjct 22047 GTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCTGA 21990 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||| || |||| | ||||| || | |||| ||| | | Sbjct 21989 GGTAATGATTAATAGGGACAGATAGGGGCATTCGTATTGCGACGTTAGAGGTAAAAATTT 21930 Query 182 TGGAT 186 ||||| Sbjct 21929 TGGAT 21925 >seq17022 Length=10828 Score = 77.0 bits (84), Expect = 3e-12 Identities = 110/148 (74%), Gaps = 13/148 (9%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTAC 66 || ||||||||||| ||||||||| | | ||||||||| | || |||||| | | Sbjct 10807 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATAATCGCCTGAATAC--TGC 10750 Query 67 ---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121 ||||||||||| ||||| || | |||||||||||||| ||||| | ||| | || Sbjct 10749 GTGCATGGAATAATGCAATAGCACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 10692 Query 122 CGTAATG-ATAAATACGGATAGTCGGGG 148 |||||| || |||| ||| || |||| Sbjct 10691 GGTAATGAATTAATAGGGACAGATGGGG 10664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511901985440