Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20cornetzi_20[refseq_20GCF_5F001594075.1_202016-03-25] 19,761 sequences; 369,438,293 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq16010 435 9e-120 seq16224 410 4e-112 seq3454 273 7e-71 seq11022 86.0 2e-14 seq15988 75.2 3e-11 >seq16010 Length=70657 Score = 435 bits (482), Expect = 9e-120 Identities = 424/541 (78%), Gaps = 41/541 (8%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 22368 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 22427 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22428 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 22487 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 22488 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 22547 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||| |||||||| |||||| ||||||| || | ||||||| Sbjct 22548 AGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 22607 Query 240 TC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCCCCGA 289 | ||| || |||||| | | |||||||| || ||||||| || | | || Sbjct 22608 GCTAAGACCGTGCGATCAGCATAAAGTTATTCAGAGTCACCAAAATAAACGGTGGACGGA 22667 Query 290 AGG--------------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC----GAAG 331 || || | | |||| |||||||||| ||||||| | Sbjct 22668 CGGACAACCGCCCGTTACCGATTGGTTTTGATCTAATAAAAGTGTCCCTTCCATCACTGG 22727 Query 332 TCGGG---GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTA 385 ||||| | ||| |||||||||||||||||||||||||| |||||||| ||| || Sbjct 22728 TCGGGACTCTGTTTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGT- 22786 Query 386 AGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA 445 ||||| ||| ||| ||| ||||||||||||||||||||||||| ||||||| || | Sbjct 22787 GGGTACAATCTAATGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA---A 22843 Query 446 TT--GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 || || | ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22844 TTCGGCATGCACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 22903 Query 504 G 504 | Sbjct 22904 G 22904 >seq16224 Length=27884 Score = 410 bits (454), Expect = 4e-112 Identities = 420/543 (77%), Gaps = 43/543 (8%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 8349 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 8408 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8409 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 8468 Query 120 TTCTCAGGCTCCCTCTCCGG--AATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 |||||||||||||||||||| ||||||||||| ||||| |||||| |||| |||||| Sbjct 8469 TTCTCAGGCTCCCTCTCCGGAAAATCGAACCCTGATTCCTCGTTACGCGTTACAACCATG 8528 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||||| | ||||||||||| | |||||| |||||| ||||||| || | |||||| Sbjct 8529 GTAGGCGCAGAACCTACCATCGACAATTGATAAGGCAGACATTTGAAAGATGCGTCGCCG 8588 Query 238 GCTC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCCCC 287 | | ||| || |||||| | |||||||| || ||||||| || | | Sbjct 8589 GTGCTAAGACCGTGCGATCAGCACAAAGTTATTCAGAGTCACCAAAATAAACGGTGGACG 8648 Query 288 GAAGG--------------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC----GA 329 || || || | | |||| |||||||||| | ||||||| Sbjct 8649 GACGGACAACCGCCCGCCACCGATTGGTTTTGATCTAATAAAAGCGTCCCTTCCATCACT 8708 Query 330 AGTCGGG---GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---G 383 |||||| | ||| |||||||||||||||||||||| ||| |||||||| ||| | Sbjct 8709 GGTCGGGAGTCTGTTTTGCATGTATTAGCTCTAGAATTATCACAGTTATCCAAGTAAATG 8768 Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443 | ||||| ||| ||| ||| ||||||||||||||||||||||||| ||||||| || Sbjct 8769 T-GGGTACAATCTAATGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA-- 8825 Query 444 GATT--GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501 ||| || | ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 8826 -ATTCGGCATGCACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 8884 Query 502 CAG 504 ||| Sbjct 8885 CAG 8887 >seq3454 Length=215 Score = 273 bits (302), Expect = 7e-71 Identities = 192/215 (89%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 207 ATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTAT 266 |||||||||| ||||||||||| ||||||| || ||||||||||||||||| ||||||| Sbjct 1 ATAGGGCAGATATTTGAATGAAGCATCGCCAGCACAAGGCCATGCGATTCGAAAAGTTAT 60 Query 267 TATGAATCACCAAGG-AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTT 325 |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct 61 CATGAATCACCAAGGGAGCGGCGAACCGCGTTGGTTTTTTATCTAATAAATACACCCCTT 120 Query 326 CC-GAAGTCGGGGTTTT-TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 383 || ||||||||||| | | |||||||||||||||||||||||||| |||||||| |||| Sbjct 121 CCAGAAGTCGGGGTCTCGTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG 180 Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 |||||| ||||||||||| |||||||||||||| Sbjct 181 CAAGGTATCATCAAATAAACTATAACTGATTTAAT 215 >seq11022 Length=307 Score = 86.0 bits (94), Expect = 2e-14 Identities = 47/47 (100%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 47 >seq15988 Length=911260 Score = 75.2 bits (82), Expect = 3e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| |||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 846436 ACTGAGACATATATGGCTTAATCTTTGAGACAAGCATATGACTACTGACAG 846486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510101529856