Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016-
03-25] 5,836 sequences; 291,747,019 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq842 214 3e-53
>seq842
Length=227
Score = 214 bits (236), Expect = 3e-53
Identities = 181/218 (83%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 15 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 72
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | ||||||||||| | ||||| | ||||| | | |||| | ||
Sbjct 73 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 132
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| ||||||| || | || || ||| | | |||||||||||||||||||
Sbjct 133 ACCCGGGCCTTTCGGCCAGGGA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 189
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||||||||||||||||||||||||||||||||||||||
Sbjct 190 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751957484740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |