Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq538 145 1e-32 >seq538 Length=215 Score = 145 bits (160), Expect = 1e-32 Identities = 163/213 (77%), Gaps = 9/213 (4%) Strand=Plus/Minus Query 41 GCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCA 100 || ||| |||| |||| | | ||| | || ||||||||||| ||||||||||| | | Sbjct 215 GCTCTTTACTGAGTGTCGAGTCGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTTA 156 Query 101 AAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||| | | || |||||| |||||||||||| ||||||||| | ||||| Sbjct 155 AAGCAGGCTATCCTCGCCTGAATACTGCGTGCATGGAATAATGGAATAGGACCT-CGGTT 97 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGTC 213 ||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| | Sbjct 96 CTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCATT 38 Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||| || ||||||||||||||||||| Sbjct 37 CGTATTGCGACGTTAGAGGTGAAATTCTTGGAT 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915146588928