Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1574 136 2e-29 seq18 93.3 2e-16 >seq1574 Length=280 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 190 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 131 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 130 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 71 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 70 ATAGGGGCGA 61 >seq18 Length=200 Score = 93.3 bits (102), Expect = 2e-16 Identities = 85/105 (81%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCG 137 ||| | | ||||| |||||||| | ||| ||||||||||||| ||||||| |||| | Sbjct 200 AAACTCCATCTAAGGCTAAATAC-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGG 142 Query 138 AAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 |||| ||||||| |||||| | |||||||| || || |||||||| Sbjct 141 AAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAAGAGTACGTGAAA 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079874817800