Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016-
03-25] 5,836 sequences; 291,747,019 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq4417 268 2e-69
seq5088 244 2e-62
>seq4417
Length=1354397
Score = 268 bits (296), Expect = 2e-69
Identities = 235/290 (81%), Gaps = 12/290 (4%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| || | ||| || ||||||||||||||||| |||||||||
Sbjct 1322029 TACTGAGCAGGATTACTATGGCAATGACTAGTTATCAGTAGGGTAAAACTGACCTGTCTC 1322088
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||| |||||||| || ||||||||||| || | ||||||||||||| | |||| ||
Sbjct 1322089 ACGACGCTCTAAACCTAGTTCACGTTCCCTGTTGGCGGGTGAACAATCCGATGCTTGGCG 1322148
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1322149 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 1322208
Query 180 -------TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232
||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1322209 CGCTAAGCGAACGCTTGGCCACCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACT 1322268
Query 233 TCTAGCCTCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280
||| || ||| ||| | | | |||||||||||| ||| |||||
Sbjct 1322269 TCTTGCTGAAAACTCTTCAA--GCCAAAAGGATCGATAAGCCGTGCTTTC 1322316
>seq5088
Length=261818
Score = 244 bits (270), Expect = 2e-62
Identities = 204/248 (82%), Gaps = 10/248 (4%)
Strand=Plus/Minus
Query 6 AGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGG------GTAAAACTAACCTGTCT 58
||| ||||||| |||| ||| |||||||||||| |||||||||||||||||
Sbjct 106342 AGCAGAATTACTATTGCAATGACTTGTCATCAGTAGGTAGACAGTAAAACTAACCTGTCT 106283
Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118
||||| ||| ||||||||||||| |||||||||| | || || ||||||| |||||| |
Sbjct 106282 CATGATGGTTTAAACCCAGCTCATGTTCCCTATTGGCGGATGTACAATCCGACGCTTGGC 106223
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
||||||||||| ||||||| |||| |||| ||| ||||||||||| || |||||
Sbjct 106222 GAATTCTGCTTTTCAATGATAGTAAGAACCGATATCAAAGGATCAAAA---AAGGTCGCA 106166
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||
Sbjct 106165 ATGAACGCTTGTCTGCCACAAGCCAGTTATCCCTGTGGTGACTTTTCTGACACCTCTTGC 106106
Query 239 CTCAAATT 246
|||||
Sbjct 106105 TGAAAATT 106098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854350137216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |