Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq842 210 4e-52 >seq842 Length=227 Score = 210 bits (232), Expect = 4e-52 Identities = 176/215 (82%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 227 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGG 168 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 | || || || || |||||| |||| | |||||| | | || ||| ||||| Sbjct 167 AATCAGCGTGTGTT---CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTG 111 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 || ||||| | | |||||||| || | | | |||||||||| || |||||||||| ||| Sbjct 110 CTAGGGATTGGGGCTTGCAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTC 51 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| |||||||||||||||||||||||||||| Sbjct 50 ATAAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947144721408