Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016-
03-25] 5,836 sequences; 291,747,019 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1488 194 5e-47
>seq1488
Length=272
Score = 194 bits (214), Expect = 5e-47
Identities = 179/221 (81%), Gaps = 17/221 (8%)
Strand=Plus/Minus
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAA----GTCGGGGTT---TTTAGCATG 348
|||||||| |||||||||| | ||||||| |||||| | ||| |||||
Sbjct 269 TTGGTTTTG-ATCTAATAAAAGCGTCCCTTCCATCACTGGTCGGGACTCTGTTTTGCATG 211
Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAAATAAACGA 405
||||||||||||||||||||| |||||||| ||| || ||||| ||| ||| ||| |
Sbjct 210 TATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTG-GGTACAATCTAATGAACCA 152
Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATACTTAGACAT 463
|||||||||||||||||||||||| ||||||| || ||| || | ||| ||||||
Sbjct 151 TAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA---ATTCGGCATGCACTGAGACAT 95
Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||||||
Sbjct 94 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 54
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510311853056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |