Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4511 116 3e-21 >seq4511 Length=1767931 Score = 116 bits (128), Expect = 3e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 ||||| || || |||||||||||||| || |||||||| ||||||||| | | || | Sbjct 465983 CATGTCTTAGCATTCTTTGCCGCTTCCGATGGTATCGTTAATGAGAATCTGATTGAGAGA 465924 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| || |||||| || | | || || ||||||||||| ||||| || |||||||| Sbjct 465923 TTCAGCCAAGAGGTGAAAATTCCCGAAGCACGTTGTTTCTATGGCTTTCAAATTGCCATA 465864 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 || ||| | || || ||||||||| | | ||||| || || || || Sbjct 465863 GAAAATATTCATTCTGAGATGTACTCTTTGCTCATTGAAACTTATAT 465817 Score = 109 bits (120), Expect = 4e-19 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || || ||||| || ||||| | || |||| | |||||| |||||| || ||| Sbjct 464772 TTATTTAATGCGATTGAGACACTTCCTTGTGTGAGGAAGAAAGCTACTTGGGCATTAAAT 464713 Query 61456 TGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||| | || | | || |||| ||| ||||| | | |||||||||| ||| || Sbjct 464712 TGGATTAATCATGAGAGCG-CTACGTTTCCCGAACGTGTAGTCGCATTTGCGGCGGTTGA 464654 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 |||| | || |||||||| || || || || |||||| | |||||||| ||| | || Sbjct 464653 GGGTATCTTCTTCAGTGGCAGTTTCGCAGCCATTTTTTGGCTAAAGAAACGAGGAGTCAT 464594 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||| ||||| ||||||||||| || | || || || ||||| Sbjct 464593 GCCAGGTCTCACCTTCAGCAACGAACTTATCTCGCGAGACGA 464552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397539722479040