Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4435 219 6e-55 seq916 212 9e-53 >seq4435 Length=230038 Score = 219 bits (242), Expect = 6e-55 Identities = 209/258 (81%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 16815 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 16872 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | |||| | || Sbjct 16873 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 16932 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || | || || ||| | | ||||||||||||||||||| Sbjct 16933 ACCCGGGCCTTTCGGCCAGGGA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 16989 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 16990 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 17046 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 17047 AGCCGCCTGTCCCTCTAA 17064 >seq916 Length=283 Score = 212 bits (234), Expect = 9e-53 Identities = 186/226 (82%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 62 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 119 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | |||| | || Sbjct 120 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 179 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || | || || ||| | | ||||||||||||||||||| Sbjct 180 ACCCGGGCCTTTCGGCCAGGGA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 236 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||||||||||||||| ||||||||| ||||| || Sbjct 237 GCCCAGAACATCTAAGGGCATCACAGATCTGTTATTG-CTCAATCT 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751966321445