Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4435 183 6e-44 >seq4435 Length=230038 Score = 183 bits (202), Expect = 6e-44 Identities = 216/286 (76%), Gaps = 10/286 (3%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| |||| | | ||| | || ||||||||||| ||||||||||| | Sbjct 17784 TGCTCTTTACTGAGTGTCGAGTCGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 17725 Query 100 AAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| | | || |||||| |||||||||||| ||||||||| | |||| Sbjct 17724 AAAGCAGGCTATCCTCGCCTGAATACTGCGTGCATGGAATAATGGAATAGGACCT-CGGT 17666 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| | Sbjct 17665 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 17607 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| || ||||||| Sbjct 17606 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAAAG 17547 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||| |||||||||||||||| ||||||||||||| || Sbjct 17546 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 17502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915157690304