Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4435 136 2e-29 seq2577 114 5e-23 seq3869 113 2e-22 >seq4435 Length=230038 Score = 136 bits (150), Expect = 2e-29 Identities = 118/144 (82%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||| | | ||||| ||||||| Sbjct 15198 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 15139 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 15138 AC-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 15080 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 15079 GAGAGAGTTCAAGAGTACGTGAAA 15056 >seq2577 Length=17212 Score = 114 bits (126), Expect = 5e-23 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 |||||| || ||| |||||||||||||||||||||||| ||| | | |||| ||| Sbjct 10724 AAGAGCGTACACGTTAGGACCCGAAAGATGGTGAACTATGTCTGGTCAAGACGAAGTCAG 10783 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 | ||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||| Sbjct 10784 GGAAAATCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGG 10843 Query 673 TATAGGGGCGA 683 ||||||||||| Sbjct 10844 TATAGGGGCGA 10854 >seq3869 Length=61123 Score = 113 bits (124), Expect = 2e-22 Identities = 104/129 (81%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||||| | |||| ||||||| Sbjct 26657 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAATTCCACCTAAGGCTAAAT 26598 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| | ||||| |||| ||||| ||||||| | |||| | Sbjct 26597 AC-GACCACGAGACCGATAGCGAATAAGTACCGTGAGGGAAAGTTGAAAAGAATTTTGAA 26539 Query 159 AAGAGAGTT 167 |||||||| Sbjct 26538 GAGAGAGTT 26530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079900836650